Eucalyptus grandis (rose gum): 104435456
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Entry
104435456 CDS
T03547
Name
(RefSeq) E3 ubiquitin-protein ligase HAKAI homolog
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egr03019
]
104435456
04131 Membrane trafficking [BR:
egr04131
]
104435456
04121 Ubiquitin system [BR:
egr04121
]
104435456
Enzymes [BR:
egr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104435456
Messenger RNA biogenesis [BR:
egr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
104435456
Membrane trafficking [BR:
egr04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
104435456
Ubiquitin system [BR:
egr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104435456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
104435456
NCBI-ProteinID:
XP_039166895
LinkDB
All DBs
Position
1:complement(22050933..22054665)
Genome browser
AA seq
431 aa
AA seq
DB search
MLQIRLKRDPIADGGGGLKPSPAETVTVACPDHLVLADLPVAKGLGSAAAASVVKPVGRK
SRRQLGERVHFCVRCDFPIAIYGRLSPCEHAFCLDCARSDSICYLCDERIQKIQTIKMME
GLFICAAPHCLKSFLKKSEFESHIHETHVDLLQPNAEKEDGNESDARSIKQSTASESTAR
APPRPVISPGSSQLHDRDDKARHQHGREQPPPRPIMHQKPPAFLGQAQNNPSDSQADNRL
PGFDRRFHMDVQGGPQQESSHFPEKQPGVLSDSPFQEYPLHSMQQPNFVVPLQSNQMLTP
PPPFGFPPYPIEGAQPFFPTPYDTVRQDSAPEGGPEPGSLLGFPPGPPGGVNFMAGYPQP
WNTGMAAPFEPPTGGQGAGDAYANPADVQGRVPLYQGDYMRNAGTLPLNPPPPPPLASKG
METARGGSSVM
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagatccgattgaagagggacccgatcgccgacggcggcggggggctgaagccg
tcgcccgcggagaccgtgacggtcgcctgccccgaccacctcgtcctcgccgacctcccg
gtggcgaagggcctcgggtccgccgccgccgcctccgtcgtgaagcccgtcggccgcaag
tcccgccgccagctcggggagcgcgtccacttctgcgtccgctgcgacttcccgatcgcc
atctacgggcgcctgagcccttgtgagcatgccttttgtcttgactgtgccaggagtgat
tcaatctgttatctgtgtgatgaacgtatacagaaaattcaaaccataaagatgatggag
ggactctttatatgtgcagcaccccactgtctcaagtcttttctaaagaaaagtgaattt
gaatctcatatacatgagacccatgttgatcttcttcagccaaatgcagaaaaggaagat
ggaaatgaatcagatgcacgcagtatcaaacaatctactgcttctgaatctaccgcacga
gctccaccaaggcctgttatttctcctggttcatcacagcttcatgatcgtgacgacaag
gctcgccatcagcatggaagagaacagcctcctccaagaccaattatgcaccagaagcca
ccagctttcttagggcaggcccaaaacaatccttcagactcgcaagcagacaaccgtctt
ccagggtttgataggcgcttccatatggatgtgcagggtggaccacaacaagaatctagc
catttcccagagaaacagcctggagttttatcagattctccctttcaagaataccctctg
cattctatgcaacaaccaaactttgttgtgccattacagtcaaatcaaatgctcacacct
ccacctcctttcggtttccctccttaccccattgagggagctcagccatttttccccaca
ccctatgatacagtgcggcaggattcagctcctgaaggtggtccagagccaggttcattg
ctgggattcccaccaggtccacctggtggtgtgaatttcatggctggctatcctcagcca
tggaacactgggatggctgcaccatttgaacctccgacaggaggacaaggagctggagat
gcttatgcaaatcccgcagatgtccaaggaagagtcccattataccagggagattacatg
cgaaatgcgggaacattgcctttgaatcctcctccgccacctcctttagcaagcaagggt
atggaaacagctcgagggggtagtagtgtgatgtaa
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