KEGG   Eucalyptus grandis (rose gum): 104435893
Entry
104435893         CDS       T03547                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    104435893
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:egr03021]
    104435893
Enzymes [BR:egr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     104435893
Transcription machinery [BR:egr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     104435893
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 VMAP-M5 DUF2002 CFAP77
Other DBs
NCBI-GeneID: 104435893
NCBI-ProteinID: XP_010046894
UniProt: A0A059CJM8
LinkDB
Position
1:complement(38200464..38208385)
AA seq 1198 aa
MGEPSSHGGRMGKRSDGVSLNGDEMDMSSDDEELVDSASLRDLGEPFLMDFCRKASTAFF
HEYGLISHQINSFNDFIENGIQNVFDSFGDIMVEPGYDPSKKGESDWRYALVRFGKVTLD
RPQFSGDKLAECGKDYLNLLPRHARLQNMTYSSRMKVNINLQVYTQKLVRSDKFKTGKEQ
FVEKEVTSDQSKDVVVGRIPIMVKSKLCWMSETEKGDCDFDLGGYFLVKGAEKTFIAQEQ
ISLKKLWISDNQGWTIAYRSTWKRKRLYIKLAGNSDVDYVRGEEKVLTVYFLSTEISIWI
LFFALGVSSDKEVVELIDFGHDDSRVVNILFASIHEADEKYKGFRKGGKALSEVEKSIKN
CKFPPAESIEECFDNYLFPSLTGRKRKARYLAYMVKCLLQAYTGRRKCDNKDDFRNKRLD
LAGELLERELRVQILNARRRMMRAIQRDLYPDRSIQDIEHYLDASIITNGLSRAFSTGAW
SHPFKAERISGVVATLRRTNPLQAVSDMRKMRQHVNYTGKVGDARYPHPSHWGKVCFLST
PDGENCGLVKNLAATGLVSTNSLEPLDDILLDCGMEKVADDSSTSLHGKIKIFLNGDWVG
ICENSLSFVNNLRNNRRRKELPSQVEIKRDIHQGEVRIFSDSGRILRPLLVVNNLMRIKA
LKGDQYDFPTLLNKGIVELIGAEEEEDCCTAWSVKNLFKEDDQNRPVKYTHCEFDMSYLL
GLSCGIVPFANHDHARRVLYESEKHSQQGIGFSTTNPNIRVDTLSHQLYYPQRPLFRTMI
SDCLGKQGNSLGNKGMLPKPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASMERGMFRSEH
IRSYKADVENKESQQKKHRSEDSINFGKMQSKIGRVDSLDDDGLPFVGANMQSGDIVIGR
CAESGADHSIKLKHTERGMVQKVVLSANDDGKNFAVVSLRQVRSPCLGDKFASMHGQKGV
LGFLESQENFPFTVQGIVPDVVINPHAFPSRQTPGQLLEAALGKGIALGGPVKYATPFST
PSVEDITNQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLIHMAEDKVKFRNTG
PVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNM
ANVIQRPVPGGRKIRGPYCRTCDSADDIVKVNVPYGAKLLCQELFSMGISLKFDTQLC
NT seq 3597 nt   +upstreamnt  +downstreamnt
atgggtgaaccttcttctcacgggggacgaatgggtaaaagaagtgatggggtgtcgctc
aacggtgatgagatggacatgtctagcgacgacgaagagcttgttgactctgcgagctta
cgtgaccttggagagccatttctgatggacttctgtagaaaggcatccactgcattcttc
catgagtacggtctcatcagtcaccagatcaactccttcaacgattttatcgaaaatgga
atccagaacgtttttgattcctttggagatattatggttgagcccggttatgatccctca
aaaaagggtgagagtgactggcgctatgcactcgtgaggttcggaaaggtcacgcttgac
cgaccgcagttttctggtgataagctagccgaatgtgggaaggattatttgaatttactg
ccgaggcatgctaggctccaaaatatgacatattcatcgcggatgaaagtgaacataaat
cttcaggtgtacacccagaaattggtgcgcagtgacaagttcaaaactgggaaagaacag
tttgtggagaaggaggtgacgagtgatcaaagtaaagatgtcgtggttgggaggattccc
atcatggtgaaatccaaattatgctggatgagcgaaactgagaaaggcgactgtgacttt
gatcttggaggttactttctagtcaagggtgcagaaaagacatttatagcacaagagcag
atcagcttgaagaaactctggatttctgataatcagggttggacaattgcataccggtcg
acgtggaagaggaaacggttatatataaagcttgcaggaaatagtgatgttgattatgtc
agaggggaagaaaaggttctcacagtatactttttgtcgacggagatttctatatggata
ttattttttgccctcggtgtgtcatcagacaaagaagttgtggagctaattgattttggt
cacgatgattccagggttgtgaacattctatttgcttccattcatgaagctgatgagaaa
tataagggtttccgcaaaggtgggaaagcacttagtgaagtagagaaaagcataaaaaat
tgcaaatttcctcctgcagaatcaattgaagagtgctttgacaactatttgtttccgagt
ctgactggccgtaaacggaaggctagatatcttgcttatatggtgaaatgcctgttgcaa
gcgtataccggtcgcagaaaatgcgataacaaggacgactttagaaataagaggttggac
ttggctggggagcttcttgagagagagctgagagtgcaaattttgaacgcccgaaggcgc
atgatgagggctatccagagagatctctatccagaccgtagtattcaagacatcgaacac
tatctagatgcatccatcatcaccaatggtctttctagggcattttcaactggagcgtgg
tcacatccttttaaagcagaaaggatatcaggtgttgtggcaactctacgacgaacaaat
ccattgcaagcagtttctgatatgagaaaaatgcgccaacatgtcaattacactgggaaa
gttggagatgcccgatatccgcacccttcccactggggcaaagtgtgtttcctgtccacg
cctgatggtgaaaattgtgggcttgtgaaaaatttagctgcgacaggccttgtgagtacc
aattcgttggaacctctggatgatatactgcttgactgtggaatggaaaaggttgcagat
gactcttctacttcacttcatggaaaaatcaagattttcctgaatggagattgggtcggc
atctgtgagaactctctttcatttgtcaacaatctaagaaacaatcggcgccggaaggag
ctgccttcccaggtggagatcaagagggatatacatcagggagaagtgcggatattttct
gattctggaagaattctccgtcctcttttggtggtcaacaatttaatgcgaatcaaagca
ctgaaaggggaccagtatgatttcccaactttgttgaacaaggggatcgttgaacttatt
ggggccgaagaggaagaagactgctgtacagcttggagtgtcaaaaacctcttcaaggaa
gatgatcaaaaccgccctgtaaaatatacacattgtgaatttgacatgtcatatctgtta
gggttaagctgtggtatcgttccgtttgcaaatcatgaccatgcaagaagagtcctctat
gagtctgagaagcattcccagcagggaattggtttctccacaacgaatccaaatatcagg
gtagacactctttcccaccagttatactatcctcagaggccacttttccgaacaatgata
tctgattgcctgggaaaacaagggaactctcttggtaacaagggaatgctaccaaagccg
gagttctataatggccagaatgctattgtagcagtgaatgttcatctcggctataaccag
gaggactccttagtgatgaatcgtgcttcaatggaacggggaatgttccgatcagagcac
atcaggagttacaaagctgacgttgagaataaagaatctcaacaaaaaaagcatagatca
gaggactcgataaattttggaaagatgcagagcaaaattggacgagttgacagccttgat
gacgatggccttccatttgttggtgccaacatgcagagcggtgatattgtcatcggtagg
tgtgcagaatctggggccgatcacagtattaagctcaagcacacagaaaggggaatggta
cagaaggttgtgctctctgcaaatgatgatggaaagaactttgctgtggtttctcttaga
caggttcgatccccgtgccttggagacaagtttgccagcatgcatgggcaaaagggtgtc
cttggctttctcgagtcccaagagaatttccccttcaccgtgcagggcatagtcccagat
gtcgttataaacccgcacgcttttccctcacggcaaacacctggccagctgctggaggct
gctttaggaaaggggattgctcttggagggccagtgaaatatgctacccctttctctacg
ccctcggtggaggacattaccaaccagttgcatagggctggattttcgaggtgggggaac
gaaagagtgtacaatggtcggactggtgaaatggtccgatcattaatatttatgggcccg
acattttaccagcgcctcatccacatggctgaggataaagtcaaattcagaaatacaggg
ccagttcacccgctcactcgacagccagttgcggatcgcaagcgattcggcgggatcaaa
ttcggggagatggagagagattgccttatagctcatggtgcatcagccaatctccatgag
cgcctctttacactcagtgattcctcccaaatgcatgtgtgccagaaatgcaagaatatg
gccaacgttattcagcgaccggtaccaggtggccgaaaaataagaggtccttattgccgg
acgtgtgattcagctgatgacattgtgaaggtgaatgtaccttacggtgcaaaactactg
tgccaggagctgtttagcatgggtataagccttaagtttgatacccaactgtgttag

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