Eucalyptus grandis (rose gum): 104436124
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Entry
104436124 CDS
T03547
Name
(RefSeq) LOW QUALITY PROTEIN: DNA topoisomerase 1 alpha
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
egr03032
]
104436124
Enzymes [BR:
egr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
104436124
DNA replication proteins [BR:
egr03032
]
Eukaryotic type
DNA Topoisomerases
104436124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Corona_NS2A
Fn3_PTPRU
Motif
Other DBs
NCBI-GeneID:
104436124
NCBI-ProteinID:
XP_010047151
UniProt:
A0A059CKJ9
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Position
3:3184538..3192240
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AA seq
886 aa
AA seq
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MMALQAPIKPNVSDDFDDDDDAPVVFKRTNTTTKKNLIRTEIKKPPSQRNDVLLGSSGIH
SSNGQSARSQQGKVHPSPRTSSMRSPDMSPKASSSTAKLPPVKSPPTGLKSSKSPDDQSR
HSSKQSSVVPAKEESNSDSDDDKPLSSRLQDNSGKXRATPVLSPSLGKVSSKYSPDDSDD
EKPLASRLPLKSNASTSSHNSFASNEKKRLVAKTQENGFALSRDQAKSSTVTSKRPLEKT
TLSGQLLVKKLKTSDASTSTKSKPSVKGEPESDDDDHIPISQRIKSAAASASGNKSSSAK
DSAKKFXXRKKITKPIKKFKKVMKNSKYSKSTKVTPTSGDGEKWTTLVHNGVIFPPPYTP
HGVKMLYKGKPVDLTPAQEEVATMFAVMKDTDYMQKDKFKENFWSDWKKILGSNHVIQKL
EHCDFTPIYDWYQQEKEKKKQMTKEEKNALKEDKMKLEEKYMWAIVDGVKEKVGNFRVEP
PGLFRGRGEHPKMGKLKRRIRPRDITINIGKGVPAPECPIPGEKWKEVRHDNTVTWLAFW
NDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIANIRTAYTKNFTSKDAMKRQI
AVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAISPNSLEFNFLGKDSIRYENTV
EVELPVYKAIVHFQSGKKPGDPLFDELDTTKLNAHLKELMPGLTAKVFRTYNASITLDEM
LSRDTKDGEVAEKVVVYQRANKEVAIICNHQRSISKTHAAQMTRLQEKIDELQDNMKELK
VDLDRSRKGKPPLKGADGKQKRNLSSDALEKKIAQIEAKIEKMERDKTTREDLKTVALGT
SKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDAEPDFRF
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgcttcaggctcctataaagccaaatgtatctgatgatttcgatgatgatgat
gatgcgcctgtggttttcaaaaggaccaataccacaacaaagaaaaatctgataaggaca
gagataaagaagccaccttctcagaggaatgatgtgttgttggggtcctcagggatacat
tcctcaaatggccaaagtgctagatctcaacaaggtaaggtccatccttctcccaggaca
tcatccatgagatcccctgacatgagtccaaaagcatcatcttctactgccaagctcccc
ccagtgaagtcaccaccgacaggtttgaagtcgtcaaagtcaccggatgatcagtcgagg
cattcgtccaaacagagttcagtagtgcctgctaaagaggaatccaacagtgactctgat
gatgataaaccattgagtagtagacttcaggacaactctggcaaangtcgcgctacgcct
gttttatctccatcattgggaaaggtatcctcaaaatattctcctgacgattcagatgat
gaaaagcctttagcatcaaggttgcctctgaaatccaatgcctctacatcttctcataat
agttttgcttccaatgaaaagaaacgtttggtagcgaaaacacaggaaaatggttttgcc
ttaagtagggatcaggcaaagtcttccactgtgacaagtaaaaggccactagagaagaca
actttgtctggtcagttgttggtgaaaaagctaaagactagtgatgcatcaacgtcaaca
aagtcgaaaccatctgtgaaaggagaaccggagtcagatgacgatgaccacattccaatt
tcccagaggataaaaagcgcagcagcttctgcatcaggaaacaagtcttcctctgcaaag
gacagtgcgaaaaagttttaataaagaaagaagatcacaaagccaatcaagaaatttaag
aaagtaatgaaaaattcaaagtattctaaatccactaaggtaacacctacttctggcgat
ggcgaaaaatggactaccttggttcacaatggggtcatttttccacctccatatacacct
catggggtaaagatgctttacaaagggaagcctgtcgatttgactccggcacaggaggaa
gtggctacaatgtttgctgtgatgaaagatacagactacatgcagaaagataagttcaag
gagaacttttggagtgattggaaaaagattcttggaagcaatcatgtgattcagaaattg
gaacactgtgattttaccccgatatatgattggtatcagcaggagaaagagaagaagaag
caaatgaccaaagaagaaaagaatgccctcaaggaagataagatgaagctggaggagaag
tacatgtgggccattgtagatggtgtgaaagaaaaggttggaaacttcagggttgaaccg
cctggcttgttccgtggacgtggagaacatccaaagatgggaaagctgaagagacgcatt
cgccctagggatattacaatcaatattgggaaaggtgtccctgcgccagaatgtcccatc
cctggtgaaaaatggaaagaagtaaggcatgacaataccgtcacgtggttagccttttgg
aacgatcctattaatccaaaggaatttaaatatgtcttcctcgctgctagcagctccttg
aagggccaaagcgataaagagaaatatgagaaagcaaggatgttgaaggattacatagca
aacatcaggacagcatacacaaagaattttacgagtaaagatgctatgaagcggcagata
gcagttgctacatatctgattgataaactagctctcagggctggcaatgagaaggatgat
gatgaagcggatactgttgggtgctgcacgctgaaagttgaaaatgtaaaagcaattagt
ccaaattcactggagtttaactttcttggtaaagactctattagatatgaaaacactgta
gaagttgagctccctgtctacaaggcaattgtgcactttcaatctgggaaaaagcctggt
gatcctcttttcgatgagctggatacaactaaactgaatgctcatctgaaggaactcatg
cctggtctgacagcaaaagttttccgtacatataacgcttccattactttggatgagatg
ttaagtagagacaccaaagatggagaagttgcagaaaaagttgtagtctatcagcgtgca
aataaagaggttgctattatttgcaatcatcaacgtagtatttcaaaaacccatgcagca
caaatgaccaggttgcaagagaagatagatgaattgcaggacaatatgaaagagctaaaa
gtagatttggatcgttctcgaaaaggaaagcctcccttaaagggtgctgatggaaagcaa
aagaggaacttgagctcagacgcgttagagaagaagattgctcaaattgaggcgaaaatt
gagaaaatggaacgggacaaaactaccagagaagatctgaaaactgttgcactgggcaca
tccaaaatcaactatcttgacccaaggatcacagttgcatggtgcaagcggcacgaagtt
ccaattgaaaagattttcaacaagtctctgttggcaaaatttgcttgggcgatggacgcg
gaacctgacttcagattttga
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