Eucalyptus grandis (rose gum): 104436128
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Entry
104436128 CDS
T03547
Name
(RefSeq) dicer-like protein 4 isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
egr03036
]
104436128
Chromosome and associated proteins [BR:
egr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
104436128
microRNA pathway
RISC loading complex
104436128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
DEAD
Helicase_C
DND1_DSRM
ResIII
dsrm
PAZ
Cas3-like_C_2
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
104436128
NCBI-ProteinID:
XP_010047156
UniProt:
A0A059CL85
LinkDB
All DBs
Position
3:complement(3317325..3331769)
Genome browser
AA seq
1658 aa
AA seq
DB search
MPGSGAEETVRGPNGFFASRPPRPPLCSVSGAAEDDVGVSSEVGKAEKDPRKIARTYQLE
LCKKALEENVIVYLGTGSGKTHIAILLMYEMGHLIRKPSKNICVFLAPTVALVQQQARVI
GDSIDFKVGSYCGGSKRLKTHAEWEKEIEKYEVLVMTPIILQRCLSHCFIKMDSIALLIF
DECHHAQVKSGHPYAEIMRIFYKADLLKRPRIFGMTASPIVGKGASEQENLPRCINSLEN
LLNAKVYSVEDKEELDSFVASPTVKVYYYGPVVHGTSSSFVTRCWQLEEVKRQCLSTLSR
KKDDLQILRSTKRMLNRMHDNIIICAESLGFWGATQACQILLRGDYSERNALIEEAENSS
DVPLCDKYLTQAASIFASDCPKDDITSLEILKEPLFSSKLLCLVHVLSSFRSRPNAKCIV
FVNRIVIARSLTYLLQNLTMLASWKCDYLVGVHSGQRSMSRKNMKSILDNFQSGKLNLLV
ATKVGEEGLDIQTCCLVIRFDPPETVASFIQSRGRARMPQSEYAFLVDWGNQKEIDLIDN
FKKDEDRMNVEITARTSDESFSALEERIYRVDSSGASISSGSSISLLYQFCAKLPHDEYF
DPKPKFYYFDDVGGTVCHIILPPNAPIYQIVSTPRISMEAAKKDASLQAIEELHKLGALD
DFLLPQRDDDKLEEMLMSSDTDSCEDESSRGELHEMLVPEALRESWSGLERVALHTYYIE
FCPDPADRTYKEFGLFVKACLPAEAGTMEIDLHLARGRSVKTKLVPSAEVTFKKDEIVEA
QKFQEMFLKVLLDRSELQQESVPLGQGQHNDINSSSSTYYLLLPVISQNSNGRIIVDWNT
IRRCLSSSLFRNPSDTMAKTDVFPPSDLILADGPKRESDVKNSLVYAPYKKLFYFITNIN
FKKNGGSQYKDAEPLTHAEHINRTYGIHLKFPKQPLLHAKPLFNVRNLLHNRKQDDSEAH
ELEEYLIDVPPELCQLKILGFSKDLGSSLSLLPSIMHRLQNLLVAIQLKQRLSASFSEGA
KVTPNRILEALTTEKCQERFSLERLEILGDAFLKFAVGRHLFLRHEALDEGGLTRKRSKA
VNNSNLFNLAVKSNLQVYIRDQPFEASQFFALGRPCPNICNNESEGMIHSHHQNGAAPQS
KAYEVRCSKGHHWLQKKTIADVIEALVGAFIVDSGFKAATAFLRWIGLEVDFDARQVSSA
CIGSTRYLTLADCVDIDSLEDYLRYKFHHRGLLLQAFVHPSYNKHGGGCYQRLEFLGDAI
LDYLITSYLYSAYPKLKPGELTDLRSLAVNNKAFANVAVERSFHKFLLCDSSSLSEAIKD
FVDFVKRSASLKGFLEGPKCPKALGDLVESCVGAILLDTGFDLNCVWSLMLSFLDPIMRF
SNFQLNPKRELQELCQSCNLILQRSVIKKGVSYSVETKVLCKDEPLSKDEWAVASVTNLN
KQDALRNSAQKVIEKLKARGYTPKYKPLEEILKSSCKMEAKLIGYDEVPVDVMSFDVNGS
ENINMAPSNMNCSPKVYAINEASRSSSASIIPLGKQPPRLSETASGSDANEISADTGCDN
ESQRKGAIPKGSAKSHLYEICAANCWKPPEFECCKEEGPGHLKLFWYKVVVAIEDSPGMV
LECFSDPRATKKAAAEHAAEGALWYLRHEGYVHTNKVK
NT seq
4977 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcagcggagcggaggagaccgttcgggggccgaacggtttcttcgcttcgcgc
ccgcctcggcctccgttgtgtagcgtttcgggtgctgctgaagatgacgtgggggtgagc
tcggaggtgggaaaggcggagaaggacccgaggaagattgcgaggacatatcaattggag
ctttgcaagaaagctttggaggagaatgtgattgtgtacttggggactggtagtgggaag
acccatatagccattttgctaatgtatgagatgggtcacttgatacggaaacccagcaag
aacatctgcgtatttcttgcgcctactgttgctttggttcaacagcaagccagggttata
ggagattcaattgacttcaaggttggcagctactgcgggggctccaagcgattgaagaca
catgcagagtgggagaaggagatagaaaaatatgaggttcttgttatgacccctataata
ctgcaacgttgcttgtcacactgtttcatcaagatggactctattgctcttctgatattt
gacgaatgccatcatgctcaagtcaaaagtggtcatccttacgctgaaattatgaggata
ttttataaagctgatctcttgaagcggcctcggatatttggcatgacggcatctccaatt
gttggaaaaggtgcttctgagcaagaaaatcttccaagatgcatcaatagtcttgaaaat
ttgctaaatgctaaggtttactcagttgaagataaggaagaattggatagttttgtggca
tcacctactgtgaaagtgtattattacggtcctgttgtgcatggcacatctagctccttt
gtgactcgctgttggcaactcgaggaagttaaacgccagtgcctatcaacactcagcagg
aagaaagatgatcttcaaatccttcgaagcaccaaaagaatgctcaacagaatgcatgac
aatatcataatatgtgcagagagccttggattttggggagcaacacaagcttgtcagatc
ctacttagaggtgattattccgagcgtaatgcattgattgaggaagcagaaaattcaagt
gatgttcctttatgtgataaatatttaactcaggctgccagtatctttgcatctgattgc
cctaaagatgatataacatctttagagattttgaaagagccccttttctcaagcaagctc
ttatgccttgttcatgtactgtcttctttcaggtctcggccaaatgcaaagtgtatagtt
tttgtgaacaggatagttattgcgagatcattgacttacctgctgcaaaatcttacaatg
ttggcatcttggaaatgtgattatcttgtgggggttcactcaggacaaagaagcatgtca
aggaagaacatgaaaagcattctcgataatttccagtcaggaaagttgaatctattggtt
gctacaaaagtgggtgaagaaggccttgacattcagacatgctgcctggtgatacgattt
gatcctcctgaaactgtcgctagttttattcaatccagaggccgtgcacgaatgcctcaa
tcggaatatgcattcttagtggactggggcaatcagaaagagattgatctgatagataat
ttcaaaaaggatgaagatcgaatgaacgtggagatcactgctaggacatcggatgaatct
tttagtgctttggaggaaagaatatatagggtagattcttcgggcgcttccatcagttct
ggatctagtatctcattactctaccaattctgtgcgaaacttccgcatgatgagtacttt
gatcccaagccgaagttctattattttgatgatgtagggggtactgtctgccacattatt
ctacctccaaatgccccaatttaccagatcgtaagcacaccaaggatatcgatggaagct
gctaaaaaagatgcttctctacaagcaattgaagaattgcataaactaggtgctctggat
gattttctcttgccacagcgtgatgatgacaaacttgaggagatgctcatgtcttctgat
actgacagttgcgaagatgagagttcacgaggtgaactacatgagatgttagttccggag
gcactcagggaatcatggtctggcttggagagagttgctctccatacttactatatagaa
ttttgtcctgatcctgcggataggacctataaagagtttggtctctttgtgaaggcatgt
cttccagcagaggctgggacaatggaaatcgatcttcatctggctcgtggtaggtctgta
aagacaaagcttgtgccatccgcagaggttacatttaagaaagatgagattgtggaagca
cagaagtttcaggagatgtttctcaaggtcctccttgaccgatcagaattacagcaagaa
tctgttcccctgggacagggacagcataatgatatcaattcaagctcatcaacctactat
ctgttgcttccagtcatttcgcagaacagcaacggtcgtattattgtagactggaatact
atcagaagatgcttatcatcttcactcttcaggaatccatctgatacaatggcaaagaca
gatgtttttccaccatccgatttgatacttgcggatggtcccaaacgagaaagtgatgtc
aaaaatagtttagtatatgctccatataagaagttgttctacttcattactaacattaat
tttaagaagaatggaggcagccaatataaagatgcagaacctttaacccatgcagaacac
ataaatagaacgtatggtattcatcttaaatttcccaaacagcctctcctgcatgcgaaa
cctctttttaatgtgcgcaacctgctgcataaccggaagcaagatgactcagaggcacat
gaacttgaagaatacttgattgatgtacctcctgagctctgtcagctgaaaatacttggg
ttctctaaagatttggggagctctttatcattgttgccatcaatcatgcaccgtctacaa
aacttgcttgtggccattcaactgaagcagcggttatctgcttctttctcggagggagct
aaagttactcctaatagaattttagaagcgctcacaacagaaaagtgccaagagcgcttt
tctcttgaaaggcttgaaatacttggagatgctttcctcaaatttgctgttggtcgacat
ctttttctccgccatgaggcacttgatgaaggtgggctcaccaggaaacgttcgaaggct
gtaaacaattctaacttgttcaatttggctgtgaagagcaacttacaggtatacatacgt
gatcaaccattcgaagccagccaattttttgctctgggccgtccttgcccaaatatctgc
aacaacgaatcagaaggaatgatccattctcatcatcaaaatggtgcagcccctcagtca
aaagcttatgaagtcaggtgcagtaaaggtcaccactggttgcagaagaaaactattgcc
gatgtgattgaagcccttgtaggagcattcatagttgatagtggtttcaaagctgcaact
gccttccttagatggattggcctagaagttgactttgatgcacggcaagtttccagtgct
tgcattggaagtactcggtacctgactctggctgactgtgtggacattgactcacttgaa
gattatttaagatataagtttcatcatagaggtcttcttcttcaagcattcgtacatcct
tcttacaataaacatggtggtggctgttatcagcgacttgagtttcttggagacgccatc
ttggattacttgatcacgtcatatctctactctgcatatccaaagttgaaacctggagaa
ttgacagatttgagatcgctggctgtcaataataaggcatttgctaatgttgcagtcgaa
cggtccttccataagtttcttctttgtgattccagtagcctctctgaggccataaaagac
tttgtggactttgtaaagagatcagcatcattgaagggttttcttgaggggccaaaatgt
ccgaaggctcttggtgacttggtagagtcttgtgttggtgccattctccttgacacggga
ttcgatctgaactgtgtttggagcttgatgctatcctttctggatccaatcatgcgcttt
tccaacttccagctgaatccaaaacgggaactgcaagaactttgtcaatcttgcaatctg
attctgcagcgttcggtaattaagaaaggtgtatcatattcagtcgaaacaaaagttttg
tgcaaggatgaacctttgtccaaggatgaatgggctgtggcttctgtgaccaacttgaat
aaacaagatgctctcaggaactctgcacaaaaagtaattgaaaagttgaaggctcgaggt
tacacaccgaagtataagcctctcgaggaaatattgaagtcatcctgtaaaatggaagcc
aagctaataggctatgatgaagttcctgtagatgtaatgtcttttgatgttaatggatct
gaaaacatcaatatggcaccctctaacatgaattgtagccccaaagtttatgcaatcaat
gaagcttccagatcttcttccgccagcataattcctcttgggaaacagcctccgcgactt
tctgaaacagcgagtggaagtgatgccaatgagataagtgctgatactggatgtgataat
gagtcacaaagaaaaggtgcgattcccaaaggatctgcaaaatctcatttgtatgaaatt
tgtgctgctaattgttggaaaccgccagagtttgagtgttgcaaagaggaaggaccagga
cacttaaagctgttctggtacaaggtggttgttgcgatagaagattcgccgggcatggtt
ttggaatgctttagtgatcctagggcaacaaagaaagctgcagccgagcatgcagcagaa
ggggctctttggtatttaagacatgaaggatacgtccatacaaataaagtgaagtag
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integrated database retrieval system
