Eucalyptus grandis (rose gum): 104436273
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Entry
104436273 CDS
T03547
Name
(RefSeq) RNA polymerase sigma factor sigC
KO
K03093
RNA polymerase sigma-I factor
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egr03021
]
104436273
Transcription machinery [BR:
egr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
104436273
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
104436273
NCBI-ProteinID:
XP_010047303
UniProt:
A0A059CMM0
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Position
3:6577813..6582245
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AA seq
551 aa
AA seq
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MGMGFRLNLKCCVVPVQSHLLSSSPTRLSSSVRGKEASFSSGRLSSLSSIAEEVEPCHKY
HSRSCKCSSASAPALEDGLSEMTNTEVTIGKRPFGSINSDPGGIHISHKARNSKGNTTPK
SVKAAHFSLLMDNLNALEETLADSNALNLERDILLQLGRLGALKLFHTCLSKAFDAPDAC
EVSDKTSSKRDNHVKRIIRSGKSEMRKSRRERNSAKPNQNSPFSLLSTANQKWLQQPSVS
SLRRASNSKRRRSIIARNEAEMSRGVKVVAELEKLRAILEEESGQVPSLRTWAEAAGVDE
NVLRQNLHFGWFCRDELLRSTRSLVIFLTRNYRGLGIAHEDLIQAGNMGVLRGAERFDHT
RGYRFSTYVQYWIRKSMSRMVAWNARGIRIPTTLATAVNQIQKARKSLNNHHRKYPDDME
IAKLTGFSVAKVRSASQCLRVVGSIDQKIGDCINAKYMEFTPDRSLRSPEETVLRQNMSS
QIQELLSGLDFRERQVLILRYGLKDNQVKSLEEIGRLFNVSKEWIRRIERKAMEKLRDKD
VYSSLSHYRNI
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgggcatgggtttcaggctcaacctcaagtgctgcgtcgtccccgtccagtctcatctc
ctctccagctcccccactcggctctcttcctctgtcagaggcaaggaagcttcatttagc
tcaggaagattgtcttctctgtccagtatagccgaggaggttgagccctgccataagtac
cattcgagatcgtgtaaatgttcgtctgcgtccgctcctgctttggaagatggtctctcc
gaaatgacgaatacggaggtaaccattggcaagaggccattcggtagtataaacagtgat
cctggtgggattcacatatcacacaaagcaagaaactctaaaggcaatactaccccaaaa
tcagtcaaggcagcgcattttagtttgttaatggataatcttaatgcattagaggaaact
cttgcagattcaaatgcgttaaacttggagagagatattttgctacagttaggaagactt
ggagctctaaagttatttcatacctgtctgtcaaaagctttcgatgccccagatgcttgt
gaagtgtctgataagacgagcagtaaaagggacaaccatgtcaaaagaatcattcggtca
gggaaaagcgaaatgagaaaatcaagaagagaaagaaattctgcaaaacccaaccaaaat
tctcctttttcattgctttcgactgccaatcagaagtggctccaacaaccttcagtttcg
tctcttagacgagcatcaaattccaagagaagaagatcgataattgctaggaatgaggct
gagatgtcaagaggagttaaggtggttgcagaattggagaaattaagagcaatcttggaa
gaggagagtgggcaggtgcccagcttgcgtacctgggcagaagctgctggagttgatgaa
aatgtgctgcgtcagaacttgcattttggttggttttgcagggatgagcttttaaggagc
actcgctccttagttatatttcttacaaggaattacaggggtcttggtattgcacatgaa
gatctaattcaggcaggaaatatgggcgtgcttcgtggtgcagaaaggttcgaccacaca
agaggctacagattttccacgtatgttcagtactggatcaggaaatccatgtccagaatg
gtggcatggaatgctagagggatccggattcctaccacattagccactgcagtgaatcag
atacagaaggctcggaaatcccttaataaccaccacaggaaatatcctgacgatatggag
attgcaaagttaactggcttctccgtagctaaagtcagatcagctagccaatgcctaagg
gttgttggttcgatagatcaaaaaataggagattgcatcaatgcaaaatatatggaattt
acacctgaccggtctctgagaagccccgaggaaacagtcttacggcaaaacatgagcagc
caaattcaagagctcttgagtggcttggactttagagagaggcaagttctcatactgaga
tatgggcttaaagataatcaggttaagtcactagaagaaattggaagactattcaatgtg
agcaaggagtggataaggagaatagaaagaaaggccatggaaaaactaagggacaaagat
gtatatagcagcctgagccactatcgaaacatataa
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