Eucalyptus grandis (rose gum): 104436390
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Entry
104436390 CDS
T03547
Name
(RefSeq) RRP12-like protein isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
egr03009
]
104436390
Ribosome biogenesis [BR:
egr03009
]
Eukaryotic type
90S particles
Other 90S particles
104436390
Pre-60S particles
Other pre-60S particles
104436390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_Maestro
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
104436390
NCBI-ProteinID:
XP_010047452
LinkDB
All DBs
Position
3:8614948..8625429
Genome browser
AA seq
1292 aa
AA seq
DB search
MEGIEFDAGSSPPPHDPAAAAEDDDFCGSILARYGGSARDEHQHLCAVIGAMSQELKDQN
LPRTPIAYFGATCSSLDRILSASAGPDPQGHVVESLMTILCLLLPKVAASMVRKRSQYMS
ELVLKVVRGGSLPPGAVGSGLKCVSHLLSVSKDANWSSVAQLYGVLLGFLTDWHPKIRRQ
SHLCLRDVLQSFHGMPAVVPASEGLTSMFERFLLLAGGSKGDATEGSRGAQEVLYVLDAL
KECLPFMSLKHTTNTLKYFKTLLELRQPLVTRRVTDGLSALCLYPTSEVSPEALLDLLCS
LAHLVSTSETSVDGMTFTARLLDAGMKKVYSLNRQICVVKLPLIFNALREILPSEHEEAI
FASAETFKSLIDSCIDEDLINQGVKQIKIHANAESRKSGPTCIERICVTIESLLDYRFSA
VWDIAFQIISATFKKLENNASYLLRGTLKSLGDIQKLPDEDFPYRKQLHECVGSAVVALG
PEMFLSLLSLNLESDDLSEVNVWLFPVLKQYTVGAHLSYFMESVLDSVGFIKQKARKLEL
EGRVVSARSADALVYSLWSLLPSFCNYAVDTAQSLKDLENALCKALREEPDVRGVICSSL
QLLINQNHRVLNENDESSGTEFGTSAEKAVSRYTRQVATDNLSALRSSAREFLSVLSGIF
LNSKKDDGGCLQSTIAALSSIADKAVISRLYKSTMQKLLKVTLEAAKVRDSRKPNSMESD
DTSNESSPSVLRGKLFDLAASLLPGLNIAEVDVLFKAIQPALQDADGAIQKKAYKVLSVM
LKNYDRFLSSKLEELLKLMVEVLPACHFSAKRYRLECLYFLIVHLSKDGSDKTKPEIICS
FLTEIILALKEANKKTRNRAYDILVEIGHAFGDEEKGGTKENLLQFFNMVAGGLAGETPH
MISAAAKGLARLAYEFTDLVSTAYNVLPSTFLLLQRKNREIIKANLGLLKVLVAKSQVDS
LQMHLGSMVEGLLKWQDNTKNHFKSKVKVLLEMLVKKCGLDAVKAVMPEEHMKLLTNIRK
IKERKERKRATNSEESRSHLSKATTSRLSRWNHTKIFSDSGDEDSSDGETDYMDSETNIG
RRSRASSLLKSKATSLRSKRSHGSAKSLPEDFLDQLEDEPLDMLDRQKMRSALRGSQQGK
RKAESDDDLEIDSEGRLVIHEGKGSKKSSAANPDSDSRSEAGSHLSVDSSRKAQKRKKTS
ESGWAYTGNEYASKKARGDLKRKDKLEPYAYWPLDRKMMSRRPEHRAAARKGMTSVVKMT
KMLEGKSASSALSLKSTKFKKRANKASKMKGK
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atggagggcatcgagttcgacgcggggtcgtcgccacctccccacgaccccgccgccgcc
gccgaggacgacgacttctgcggctcgatcctcgcccgctatggcggctccgcgcgggac
gagcaccagcatctctgcgccgtgatcggcgccatgtcccaggagctcaaggaccagaac
ctgccccgcaccccgatcgcctacttcggcgccacctgctcgtcgctcgacaggatcctc
tccgcctccgccggccccgatcctcagggccacgtcgtggaatcgctgatgacgatactc
tgcctgctgttgcccaaggttgccgcttccatggtgaggaagaggagccagtatatgtcg
gagctcgttctgaaggtggtccgcggcggttctttgccgcccggagcggtgggttcgggg
ttgaagtgcgtttcgcatttgttgagcgtttctaaggatgcgaattggtctagcgtggcg
caattgtatggagttctgctcggtttcctgaccgactggcacccgaagataagaaggcaa
tcgcacctctgtttacgggatgttttgcaaagctttcacgggatgccagcagtagtgcct
gcaagcgaaggattaacaagcatgtttgaaagatttctactgcttgctggtggatcaaaa
ggcgatgctacagaaggatctagaggagcacaggaagtcctttatgttctcgacgctttg
aaagagtgtctaccattcatgtcattgaagcatacaaccaatactcttaagtacttcaaa
acccttttggaacttcgccagccccttgttacgaggcgtgtaacagatggcttgagtgct
ctttgtctatatccaacttcagaagtgtctcctgaagccctgcttgatttgttatgctca
ttagctcatttagtatctacaagtgaaacatctgtggatggcatgacattcactgctcgt
ttactggatgctggaatgaaaaaagtttattccttgaataggcaaatatgcgttgttaag
ctccctctgatattcaatgcacttagagagattctgccatctgagcatgaggaagccatt
tttgcttcagcagaaacattcaagagtctcatagactcttgcattgatgaagatttgatc
aatcaaggggtaaagcagatcaagatacatgcaaacgcagaatcaagaaaatctggaccc
acttgcatcgaaagaatttgtgtgactattgagagtttgctggattatcgttttagtgct
gtctgggacatagccttccaaattatttcagctacttttaaaaaattagaaaataatgct
tcttatcttctgagaggaacacttaagagcttgggagacatacagaagttgcctgatgaa
gattttccttacaggaaacagttgcatgaatgcgttggatcagcagttgtcgcccttggt
cccgaaatgtttttaagccttctctccctcaatctggagtctgatgacctatctgaggtg
aatgtctggctcttcccagttttgaagcagtacaccgtaggtgcccacttgagctatttc
atggaatcagttctggattcagttggttttataaaacagaaagcacgtaagcttgagcta
gaaggaagagtcgtttcagctagaagtgcagatgcccttgtatactctttatggtccctg
ttgccatcattttgcaactatgctgtggatacagctcaaagtttgaaagacttggagaat
gcattatgcaaagctcttcgtgaagaacctgatgttcgtggtgtaatatgttccagcctg
caactacttattaatcagaatcacagggttttgaatgaaaatgatgaatcttcaggcact
gagtttggtacatctgcagagaaagctgtgtctcgttacactcggcaggttgccactgat
aatttgagtgcactgaggtcatctgctcgtgaatttttgtcagttttgtctggaatcttt
ctgaattccaaaaaagatgatggtggctgtctccagtctacaattgctgctttgtcttca
atagcagataaagcagtaatatcaagactatataaaagtacaatgcaaaagctactgaaa
gtcactctggaagctgcgaaagtgcgcgattctagaaagccaaactccatggaaagtgat
gatacatccaatgaaagttcaccttctgttcttcggggaaagctatttgacttggctgct
tctcttttgcctggattgaatatcgcagaggttgatgttctgtttaaagctatacagcca
gcattgcaggacgcagacggtgctatccagaagaaggcatacaaagttctttcagtaatg
cttaagaattatgataggtttctttcatcaaagcttgaggagttgctgaagcttatggtt
gaagtgctacccgcatgtcatttttcagcaaaacgttataggcttgaatgcttgtacttt
cttatagtccatctttctaaggatggttcagacaaaaccaaacctgagatcatctgttcg
ttcttaaccgagataatattggctttgaaagaggctaacaagaagactagaaacagggca
tacgacatccttgtggaaattgggcatgcatttggtgatgaagaaaaggggggaacaaag
gaaaacttgcttcaattttttaacatggtagctggaggtttggcaggtgaaactcctcat
atgatcagtgctgcagcgaaaggcctggctcgcttggcttatgagttcacagatcttgtc
tcaactgcatacaatgttctcccttccacgtttcttcttcttcagagaaagaacagagaa
ataattaaggcaaatttaggtcttctgaaggtactggttgccaaatctcaagttgattcg
ttgcagatgcacttgggaagcatggtggaaggcttgttgaagtggcaagataacacgaaa
aatcattttaaatcaaaggttaaagtcctcctggaaatgctagtcaagaaatgtggcttg
gatgctgtaaaggctgtaatgcctgaagaacacatgaaactccttactaacataagaaag
attaaggagcgaaaggagagaaagcgagcaacgaattcagaggaaagcaggtctcatctg
tccaaagccaccacatccaggcttagcagatggaatcatacaaagatattttccgattct
ggtgatgaagacagctcagatggtgagactgattatatggacagtgagacaaatattggc
agacggagcagggcttcctcattattaaagtcaaaggctacttcattacggtctaagaga
tcgcatggatctgccaaaagcctgccagaagactttttggaccaattggaggacgaacct
ctcgatatgcttgatcggcagaaaatgaggtcagcccttagaggatcccagcaaggaaaa
cggaaggcagagtctgatgatgacctagagatagactccgaaggtcgtctagtaatccat
gagggaaaggggtcaaagaaatcctcggcagccaacccagattcagattccaggagtgaa
gctggtagtcatctttccgtggactcttcaaggaaagcccagaagcgtaaaaagacgtcg
gaatcaggctgggcttacacagggaatgagtatgctagtaagaaagctcgtggagacttg
aagaggaaggacaagcttgagccctatgcctactggcccctcgatcgtaagatgatgagc
cggagaccagagcatcgggcagcagcgaggaagggaatgacaagtgttgtgaagatgacg
aaaatgctcgaaggcaagagtgcctcgagtgcactctcccttaaaagcactaagtttaag
aagagggcaaataaagccagcaaaatgaaaggcaagtga
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