Eucalyptus grandis (rose gum): 104436428
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Entry
104436428 CDS
T03547
Name
(RefSeq) protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egr03021
]
104436428
Transcription machinery [BR:
egr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
104436428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_16
TPR_12
TPR_19
TPR_14
TPR_17
TPR_CcmH_CycH
TPR_6
TPR_11
TPR_9
TPR_7
TPR_10
ANAPC3
ARM_TT21_C
ARM_TT21_5th
Fis1_TPR_C
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
104436428
NCBI-ProteinID:
XP_010047494
UniProt:
A0A059CMN6
LinkDB
All DBs
Position
3:complement(9191213..9202897)
Genome browser
AA seq
1088 aa
AA seq
DB search
MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR
QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA
SRIDMHEPSTWVGKGQLLLGKGEIEQAFAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD
SLELYKRALIVHPDCPGAVRLGIGLCRYKLGQFEKARQAFLRVLQLDPENVEALVALAIM
DMRTNKVGGIRRGVEKMHRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTTH
GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHAFIFPYYGLGQVQLKLGDFRS
SLSNFEKVLEVYPDNCETLRVLGHIYVQLGQVEKGQEFMRKATKVDPRDAQAFLDLGELL
ISSDTGAALDAFKTARSLLKKGGQEVPVELLNNIGVIHFERGELELAEQSLKEAVGDGIW
RSFIEGKVNVSTADATACTRLYKDMQIFTQLEADNVNLELPWNKVTALFNLARLLEQLHR
MEIASILYRLIIYKYPDYIDAYLRLAAISKAQNNIQLSIELVNDALKVNEKCPNALSMLG
ELELKNDDWVKAKETFRAASEAADGKDSYSTLSLGNWNYFAAMRNEKRAPKLEATHLEKA
KELYTKVLVQHNSNLYAANGAGVVLAEKGQFDVSKDIFTQVQEAASGSIFIQLPDVWVNI
AHVYFAQGNFALAVKMYQNCLRKFYHNTDSHILLYMARTHYEAEQWQDCKKTLLRAIHLS
PANYVLRFDAGVAMQKFSASTLQKQKRTADEVRSAVAELQNAVRVFSQMAAGANLHYHGF
DEKKIDTHVGYCKHLLEAAKVHCEVAQREEEQARQRLELARQLALAEEARRKAEEQRKKQ
LEKRKLEDEQKRVQQQEEHFRRVKEQWKSSMPASKRRERSDADDEEGGHSEKRRRKGGKR
RKKERSSKSQYETEEAEAEIDDQEDEDAHLNYGEPADQIHDQDDEAEENAQGVLAAAGLE
DSDAEDEAVPPVNASRRRKAWSESDEEEEQRPESSPVRENSAELQESDGEFRADKEKRNR
DEAVDDED
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgtgtacatacccgtgcagaactcggaggaggaggtccgggtggccctcgac
cagctcccccgggacgcctccgacatcctcgacatcctcaaggccgagcaggcgccgctc
gatctctggctcatcatcgcgagagagtactttaagcaagggaagatcgaccagtttcgg
caaattctggaagaaggctcgagtcccgaaattgatgagtattatgctgatgtgaggtat
gagaggatagcgattctcaatgctttgggggcttattacagctaccttgggaaaattgag
accaaacagagagaaaaggaggaacattttattttagcgacccagtactataataaggca
tcgagaatcgatatgcatgagccttcaacttgggttggaaaaggtcaactcttactcggc
aaaggtgaaatagaacaggcatttgctgcatttaagattgtgctagatggagatcgggat
aacgtacctgctcttcttggtcaggcatgtgttgagttcaatcgcggacggtattccgat
tccttggagttatataagagggccttgatagtccaccctgattgtcctggagctgtaaga
cttggcataggtctctgtcgctataagttgggtcaatttgaaaaggctaggcaggcattt
ctgcgggttctgcagttagacccggaaaatgttgaggcccttgttgcacttgcaattatg
gatatgcgtacaaacaaagtgggtggaattaggagaggagtggaaaagatgcacagggca
ttcgagatatacccttactgtgcaatggcattgaattatctagcaaatcacttcttcttc
actgggcaacactttttggttgaacaattgacagaaactgcccttgcagtgaccactcat
gggccaacaaagtcacattcttactataacttagcaagatcttaccacagcaagggagac
tacgaaaaagcaggtctctactatatggcttctgtcaaagaaatcaacaagccacatgca
tttatttttccttattatggtctcggtcaagtacaactcaagttgggagatttcagaagt
tccttgtcaaattttgaaaaggttttggaagtatatcctgataattgcgagacattaaga
gttcttgggcacatatatgtgcaactcgggcaggtagaaaagggtcaggagtttatgagg
aaggctacaaaggttgatccacgtgatgcccaggcatttcttgatctgggagaattgttg
atatcatctgacactggcgctgctttagatgccttcaaaacggctcgtagtctgctgaaa
aagggtggccaagaagttccggtagagttgctcaataatataggagttatccactttgaa
aggggagagcttgagcttgctgagcaaagtctcaaggaggctgttggtgatggcatatgg
cgttctttcatcgagggaaaagtgaatgtcagcactgctgatgctactgcatgtactcgt
ctttataaggatatgcaaatatttacacaacttgaagcagataatgtaaacctggaatta
ccttggaataaagtgacagcacttttcaatctggcaagattactggagcagctgcacaga
atggaaattgcaagtatattatatagattgataatttacaagtatcctgactacatagat
gcatatctgaggcttgctgccatctcaaaagctcagaataacattcaattaagcattgaa
ctggttaatgatgccttgaaagtgaatgagaagtgtccaaatgcattgtccatgcttgga
gaactagagcttaaaaatgatgactgggtcaaggcgaaagaaacatttcgagctgctagt
gaagcagctgacgggaaggattcttattccacactctcgctggggaactggaactatttt
gctgcaatgcgcaatgagaagagggcacccaagctagaagccactcatttggagaaagca
aaagagctttataccaaagttctagttcagcataattctaacttatatgctgccaatggt
gctggagtggtcttggccgagaaggggcagttcgatgtttcaaaagatatcttcacgcag
gttcaagaagctgcaagtggaagtatatttattcagttgcctgacgtgtgggtcaatata
gcacatgtttattttgctcaaggaaactttgcattggctgtgaaaatgtatcaaaattgc
ttgcggaagttttatcacaatacagactctcatattcttctttatatggcgcgcactcat
tatgaagctgaacagtggcaagactgcaagaaaactttgttaagggccatccacttgtca
cctgcaaattatgtattaaggtttgatgctggtgttgcaatgcagaaattctcagcatcg
acactgcaaaaacagaagagaacagcggatgaggtgcgttcagcagttgctgagcttcag
aatgctgtgcgtgtgtttagtcagatggctgctggtgccaatcttcattatcatgggttt
gatgagaagaaaattgatacacatgttggatattgtaagcacttacttgaggctgcaaaa
gttcactgtgaggtagctcagcgcgaggaagagcaggcacggcaaagactagaacttgca
cgacagcttgcactggctgaggaagcccgccggaaagctgaagaacagaggaagaagcag
ttggaaaagagaaaactggaggatgagcagaagcgggttcagcaacaagaggagcacttc
cggcgtgtaaaggaacaatggaagagtagcatgcctgcttctaagcggagggaaaggtct
gatgctgatgatgaagagggtgggcatagcgagaagaggaggagaaaaggtggtaagaga
agaaagaaggagagaagttcaaagtcgcaatatgagacggaggaagctgaagcagaaatt
gatgatcaggaagatgaagatgcccacttaaattatggggagcctgctgatcaaatccat
gatcaagatgatgaggccgaagaaaatgcccagggtgtacttgcagcagccgggctcgaa
gattctgatgctgaggatgaggctgtgcctccagtaaatgcaagtagacggaggaaggca
tggtcagaatcagacgaggaggaggagcaacggccagaaagcagcccggtcagagagaat
tctgcggagcttcaagagagcgatggggaatttagggcggataaagagaagcggaatcga
gatgaagcagttgatgatgaagattag
DBGET
integrated database retrieval system
