Eucalyptus grandis (rose gum): 104436596
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Entry
104436596 CDS
T03547
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial isoform X1
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
egr03016
]
104436596
Enzymes [BR:
egr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
104436596
Transfer RNA biogenesis [BR:
egr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
104436596
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Gene cluster
GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
Motif
Other DBs
NCBI-GeneID:
104436596
NCBI-ProteinID:
XP_010047733
UniProt:
A0A059DFG1
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Position
1:23589463..23598309
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AA seq
796 aa
AA seq
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MMTIRAANGCSSVLRSPPPPPLRALRRLCFCPRAGTPRASSLAAAAAAALRCERTSSGHG
GGGARRYCVHSLVESVIEEIRESRRRRHTCSASKMALTSSGELLEDKLVNRALQKGLLLE
FKKDSEKVLLAVTQRPDGKKNWMVSDQNGVTSSIKPQQITFIVPGVENFDQKEISDFLQR
AEDNLDPTLLEFAWVELLEKNKSVTAEELAEMIFGSSEPLESYCAHLFLSKDEIYFTVLE
AKGSRRIYGPRPAAQVEEQMRRKLAREAAEKEIEEFVQLLTSAKLMPFPAKPRKSSWLTE
EKIRKKIESLECYAIDACKNDEQRKLAGVILKAMGLTKTASSAMNLLVDIGYFPVHVNLD
LLKLNIPTVHSEELISAAEILLSQSVDIDETERKDLTDLKVYAIDVDEADELDDALSATR
LLDGRIKVWIHVADPARFVRPGSIVDREAMKRGTSIFLPTATYPMFPEKLAMEGMSLKQG
EVCNAVSVSVVLHSDGSIAEFAVDNSIIKPTYMLTYESASELIHLNLEEEIELKILSEAA
ALRLRWRRQQGAIDTATLETRIKVPDPDEPEPEIKLYVEDQADPAMRLVSEMMILCGEVI
ASYGSQNNIPLPYRGQPQSNIDVSAFSHLPEGPVRSSALVRIMRAAEFDFGKPIRHGILG
IPGYVQFTSPIRRYMDLLAHYQLKAFLQGESLPFSAGQLEGIASTVNMNARLAKKICNTS
LRYWILEFLRRQPKEKKYHALILRFIKDRIAALLLVEVGLQASAWVSLGKDIGDEIVVRV
EESHPRDDFLSLKEVI
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgattcgggccgcgaacggctgctcctccgtgctccgctcccctcctcctcct
cctctccgcgccttgcgccgcctctgcttctgcccccgtgctgggacgccccgggcgtcc
tcccttgcggcggcggcggcggcggcgctccggtgcgagcggacctcgtccgggcatggc
ggcggcggcgctcggaggtattgcgtccacagcctcgtcgagagcgtcatcgaggagatt
agggagtcgcgccggcggaggcacacctgctctgcttccaaaatggccctcaccagcagt
ggcgaacttttggaagataagctagtaaaccgagcactccagaaagggttgctgctggag
ttcaaaaaagattccgagaaagtattgttggcggtcactcagaggcccgatggcaagaaa
aattggatggtttccgatcagaatggcgtcacatcatcaatcaagccacagcagattact
tttattgttcccggtgttgaaaattttgaccagaaagaaatttcagactttttacagagg
gctgaggataacttggacccaacattgctcgaattcgcttgggttgagcttctggagaaa
aataagtcagtaacagcagaggaattggcggagatgatcttcggcagttcagaacccttg
gagagctattgtgcacatctttttctctcaaaggatgaaatttacttcacagtccttgaa
gcaaaaggctcacgtagaatttatggtcctcggcctgctgcacaggtggaagaacagatg
cgtaggaagcttgcacgagaagcagctgagaaggaaattgaggagtttgttcagttgttg
acatctgctaagttgatgcccttccctgccaaacctcggaaatcttcatggcttacggaa
gagaaaattcgaaagaaaatagagtctcttgaatgttacgcaattgatgcatgcaaaaat
gatgagcagaggaaattagcaggcgtgatcctgaaggcaatgggactgacaaaaacagca
tcatcggcaatgaatcttctcgtagatattggctatttccctgtacatgtcaatctcgat
ctgttaaaactgaatatccctaccgttcattcagaggagctaatatcagctgctgagatt
cttttatcacagtcagttgacattgatgagactgaacggaaagatcttactgacctgaag
gtgtatgcaatcgatgttgatgaggctgatgagcttgatgatgccttgagtgcaacaaga
ttgctggatggccgaatcaaagtctggatacatgttgcggacccagccagatttgtacga
ccggggagcatagttgatagggaagcgatgaagcggggaacttctattttcttgcctacg
gccacctatccaatgttccctgagaaacttgctatggagggaatgagtttgaaacaagga
gaggtctgcaatgctgttagtgtttctgttgtcctgcattctgatggaagcattgcagaa
tttgcagttgataattctatcatcaaaccaacatatatgcttacctacgagagtgcgtct
gagctgattcatctgaacttagaagaggagattgaactgaaaattctatcagaagcagct
gctcttcgattgcgatggcgtcgacaacagggtgcaatagacacggcaactctggaaacg
cgcataaaggtgcctgatcctgatgagccagaaccagaaattaaactctatgtggaagac
caagctgaccctgccatgagacttgtctctgaaatgatgatactctgtggcgaagttata
gcctcctacggttctcaaaacaacattcccttgccttacagagggcagccacaatcgaac
attgatgtatctgcattctcacaccttccagaaggaccagttaggagttctgctttggtc
aggattatgcgtgctgcagaatttgacttcgggaagcctatacgccatggcattcttgga
attcctggttatgttcaatttacatctcctatccgtagatatatggatcttcttgctcat
tatcagttgaaggcatttcttcaaggtgaatctctccctttttcagctggacagcttgaa
gggattgcttcgactgtaaatatgaatgctaggcttgctaagaagatctgcaacacaagt
cttcgttattggatactggaatttttgagaaggcaaccaaaggaaaagaaatatcatgca
ctgattctaagatttattaaagacagaattgcagcattattgttggttgaggttggactt
caagcttcagcatgggtgtctctggggaaggacattggggatgaaatagtagttcgggtg
gaagaatctcatccacgggacgattttctttctctcaaggaagtcatttga
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