Eucalyptus grandis (rose gum): 104436824
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Entry
104436824 CDS
T03547
Name
(RefSeq) uncharacterized protein LOC104436824 isoform X1
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104436824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
egr03009
]
104436824
Ribosome biogenesis [BR:
egr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
104436824
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
Utp12
PQQ
ANAPC4_WD40
PQQ_2
WD40_2
DUF6218
Motif
Other DBs
NCBI-GeneID:
104436824
NCBI-ProteinID:
XP_039162264
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All DBs
Position
1:complement(8080137..8109101)
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AA seq
634 aa
AA seq
DB search
MGSPNIRDLLTAFSPSSEFFAISSGDGRIKIWDTLKGQIQTEFVDIAANDLTDAFMKPDR
GHLSVDYTCMKWLDLGKKRKRKHGGSLIVLGTGGGDVLALDVASGELRWRISDCHPGGVT
AISFSEKGSRVYTGGADGMICEIDPVTGNSLKRFKTSTKAISSISVSSDGSVLASASAQV
KIYSCSDQKKIQKFSGHPGAVRSMIFTNDGKYVLSCAAGERYIAVWRVDGSKMHSASCTL
SMEHPAVYLDSRCFDNGEEDLKGLYVLALTETGVCYFWFGQNIEELRNSIPAKVSLSIED
SVLKNHHGAPTILAAKLQGIPSRASGHIFISHGLLVKPLFQKILVHSGKNMNLNSSLDGI
LLPTGQSLVRAKRGQDVRNKAVTALDRANAEDALHPIPTFTDLGETKKPHQYSGIDPDDV
IADIVNSRSQAKSLGSEQMHVSADDDVEVGTSTICLEDHLRSLGFIGRNDGSFDRSAPDP
AFFKDINLEANLSNKKIRDAILSMGASDAYNLLRKLLSLWQSRSSNAKLVLPWISRILVI
HSDYVLSQEPMTELLYSFGKTAKARGAVIQPLLQLVGRLQFVAAQIDKAMHDQTRDSLHE
RQADESDDEDEDVDHVFYRDEDESGQTSDDTDDE
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgggctcgccgaacatcagagacctcttgacggcgttcagtccgtcgtcagaattcttc
gccatcagctccggcgatggccggattaagatttgggacactttgaaagggcagattcag
acggagtttgtcgacattgcggcaaatgatctgacggatgcgttcatgaagccggacagg
ggtcacctttcggttgattacacctgcatgaaatggttggatttggggaaaaagaggaaa
agaaagcatgggggctcgttgatagttttagggacaggcgggggtgatgtcctagcactc
gatgtagcatctggtgaattgagatggagaattagtgactgtcaccctgggggtgtcact
gccatctcattttctgaaaaagggtcacgcgtttacactggtggtgctgatgggatgatt
tgtgaaattgatccagtgacaggaaactccttaaaaaggtttaaaacttcaacaaaggct
atatcttccatctccgtttcatctgatggaagtgtactagcttctgcatctgcccaagta
aagatatatagttgctcagatcagaaaaagatacagaagttttctggccatcctggagct
gttcgctctatgatctttaccaatgatggaaagtatgttctttcttgtgccgctggtgaa
agatatattgctgtttggcgagttgatggtagcaaaatgcactcagcaagctgtacactg
tccatggagcatcctgcagtctatcttgacagcagatgctttgataatggagaagaagat
ctcaaaggcctgtatgttttggctcttacagagactggcgtttgttatttctggtttgga
cagaacattgaggaactacgcaattcgatacctgcaaaagtctctttatctattgaggac
tctgtattgaagaatcatcatggtgcacctacaatacttgctgcaaaattacaaggcatt
ccaagtcgtgcatctgggcacatttttatttcccatggtctgctagtaaagccactcttt
cagaaaattttagtgcattctggcaaaaacatgaatttaaacagctctttagatgggatt
cttttgcccactggtcaatccctggttagggcgaagagaggacaagatgtaaggaataaa
gcagtgacggcattggatcgagcaaatgctgaagatgccctacatccaattccaactttt
actgacttgggagaaacaaagaaaccacatcaatattctggcattgaccctgatgacgtt
attgctgatatagtcaacagcaggagtcaagcaaaatctttgggcagcgaacaaatgcat
gtttctgcagatgatgatgtagaagtgggcacgtctacaatatgcctggaggaccattta
agatcgctaggatttattggtcgaaatgatggttcttttgatagatcagctcctgatcct
gctttcttcaaggatataaatctggaagccaatctatcaaataaaaagataagggatgct
attttatccatgggagcaagtgatgcatacaacctactgagaaagcttttgtccttgtgg
cagtcaaggtcatctaatgcgaagctagtattgccgtggattagcaggatattggtcatt
cacagtgattatgtcctttctcaggaaccaatgaccgagctgctttattcttttggcaag
actgcaaaagctagaggggcggtcatccaaccattactgcagttagttggtcggctgcag
tttgttgctgctcagattgacaaggccatgcatgatcaaactagagattctcttcacgag
cgtcaagctgatgaaagtgatgatgaggatgaagacgtcgatcacgtcttttacagggat
gaggatgaatctggacaaactagtgatgatacagatgatgagtag
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