Eucalyptus grandis (rose gum): 104438013
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Entry
104438013 CDS
T03547
Name
(RefSeq) oligouridylate-binding protein 1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egr03019
]
104438013
03041 Spliceosome [BR:
egr03041
]
104438013
Messenger RNA biogenesis [BR:
egr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
104438013
Spliceosome [BR:
egr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
104438013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_5
RRM_Nup35
RRM_DEAH11
Motif
Other DBs
NCBI-GeneID:
104438013
NCBI-ProteinID:
XP_010049379
UniProt:
A0A059CVI6
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Position
3:complement(59466956..59473299)
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AA seq
414 aa
AA seq
DB search
MQQQRLLKQHAMMQQSLYHHGLLGAPQQIEPILSGNLPPGFDSTSCRSVYVGNIHPQVTE
PLLQEVFSSTGPIEGCKLIRKEKSSYGFVDYFDRRSAALSIVTLNGRHLFGQPIKVNWAY
ASSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYSSCSDARVMWDQKTGRSRGFGFVSF
RNQQDAQSAINDLNGKWLGSRQIRCNWAAKGANSGDDKQSDAKSVVELTTGTSDDGQERN
SDDAPENNPQYTTVYVGNLAPEVTSADLHRHFHALGAGVIEDVRVQRDKGFGFVRYSSHA
EAALAIQMGNARILCGKPIKCSWGNKPTPPGTSSTPLPPPSIAHIPGFSATDLAAYERQM
ALSKMGGMQALMHPQGQHILKQAAMGMGAAGASQAIYDGGFPSVATTQQLMYYH
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcagaggctcctcaagcagcacgcgatgatgcagcagtcgctctaccatcac
ggcctcctgggtgctccgcagcagatagagcctatcttgagcggaaatctgccacctggg
tttgactcaacttcatgccgcagtgtatatgttggaaacatccacccccaggtcacagaa
cccctacttcaagaggttttttcaagcactggtcctattgaaggatgcaagcttattaga
aaagagaagtcatcatatggttttgtggactactttgatagaagatctgctgctctttcc
attgtgactctcaatggaaggcatttgtttggacaaccaatcaaagtcaactgggcgtat
gctagcagtcagagagaggacacatccggtcattttaatatatttgttggtgatttgagc
ccagaggttacagatgcgacattgtttgcttgcttctctgtctattcaagctgttcagat
gcaagggtaatgtgggatcaaaagactgggcgttccagaggatttggttttgtctcgttt
cgtaatcagcaggatgctcagagtgcaataaatgatttgaatggaaagtggcttggaagt
cgtcaaatacgttgtaactgggcagcgaagggtgctaattctggtgatgataaacagagt
gatgccaaaagtgtggttgagctaacaactggaacatcagatgatggtcaagagaggaat
agtgatgatgctccagagaacaatccccaatatacaactgtttatgttggcaatcttgct
cctgaggttacttcagctgatctgcatcggcattttcatgcccttggtgctggggtcata
gaagatgtgcgggtgcaacgcgacaaaggttttgggtttgttaggtatagctcacatgct
gaagctgcactggccatacagatgggaaatgctcgcattctctgtggtaaaccaatcaag
tgctcctggggtaacaaaccaacgccaccaggaacaagttccactcctcttccaccacca
tctattgcacacataccaggcttttctgccactgatctggctgcttatgaacggcaaatg
gctctgagcaagatgggtggcatgcaagcccttatgcacccgcagggtcaacacatactc
aaacaggcagccatgggaatgggtgctgcgggagccagtcaggcaatctatgatggcggg
tttccgagtgtggcgactacccagcagcttatgtattaccattag
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