Eucalyptus grandis (rose gum): 104438359
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Entry
104438359 CDS
T03547
Name
(RefSeq) LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor homolog 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
egr01001
]
104438359
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
egr04121
]
104438359
Enzymes [BR:
egr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104438359
Protein kinases [BR:
egr01001
]
Serine/threonine kinases: Other
Other
104438359
Ubiquitin system [BR:
egr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104438359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
LisH
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
Motif
Other DBs
NCBI-GeneID:
104438359
NCBI-ProteinID:
XP_010049781
LinkDB
All DBs
Position
3:complement(71733954..71743738)
Genome browser
AA seq
1913 aa
AA seq
DB search
MEEPTRQPAAAEEARNEEEEAVAKAQSLMDRVTASPDNPSPALLHALSSLLETHECRYLE
RSDQSSNNARSTHTIGRLGNLLRDNDEFFDLVSSKYLCENTFSTSVQAAAARLLLACSLT
WVYPHVFEDDALENIKRWVIDEPADDSKFKFDAGRREASDNDMLRTYATGLLALSLSNGG
PLVEDVLTCGLSAKLMHYLRVRVLGDAGQRDTTHLAESKSTSVLNSVRGREESRGRVRQV
VEVPHSEDVRLPDERCLEDQASERDQDGGSGWQACGEDSRIAREPLDSLVNEKSKSGDLD
ESGRDESSRRRTHRGWAKSRGKGRVGEGAVENEQVLTSPGSGTRLGVGRSIKDKSSSRHV
DVKKVPDTRKLATRGADGLSSERDDLMELIGDCKVGSRDISDLVKAAVRAAEAEAREANA
PEEAIKAAAAAAAEVVKSAALEALNTKNDEEAAVSAASRAASTVVDAARAVEASRKSITV
VVESTDQGGMDVIDEDVEYFIPDMESLAQLREKYCIQCLELLGEYVEVLGPVLHEKGVDV
CLALLQRSSKYKEPSKIAVLCPDVMKLICALAAHRKFAALFVDRGGMQKLLSIPRIAQTF
FGLSFCLFTIGSIQGIMEXVCALPSDVVRQVVELAIQLLECPQDPMARKNAALFFAAAFV
FRAVLDAFDALDGLQKILGVLNDAASVRSGVNSISLGLSGSSSLRNDRSPPEVLTSSEKQ
IAYHTCVALRQYFRAHLLLIVDSIRPSKTNRNAPRNISSMRAAYKPLDISNEAMDAVFLQ
LQKDRKLGPAFVRTRWPAVDKFLACNGHLTMLELCQAPPVERYLHDLLQYALGVLHIVTL
VPQSRKMIVNATLSNERVGIAVVLDAANIASTYVDPEIIQPALNVLINLVCPPPSISNRP
PMLAQGQQSAASQSSNALAMESRDRNADRSITDRIASVAIQNDLRDRNGESSGVDRGCTT
SSGTQSSTAPLTPVSASTSGLVGDRRISLGAGAGSAGLAAQLEQGYRQARDAVRANNGIK
VLLHLLQPRIYSPPVALDCIRALACRVLLGLARDDTIAHILTKLQVGKKLSELIRDSGSQ
TLGNEQGRWQAELAQVAIELIGIVTNSGRASTLAATDAATPTLRRIERAAIAAATPITYH
SRELLLLILEHLQACGLGGSAAMLQKEAQLTPLPSTVVPASLSYTAGTQESASVQFQWPC
GRTPRGFLSEKLRFSEHNDISRLRCDSAGSSIRKKPLVFSPSFGSQSRQLSFHDGSSQLN
KKLSSVIKPPAQVIVRETPSEAMGKSFVDTDPQCKTPIILPMKRKHHEIKDSGFAIPGKR
LQTAEHGLCSPACVTPHSFRRNGTSTDPSGFSTPNSTNRDLHDRSTCLLSDVDDSPYVNC
QTGHMTFTDHGLLNDPHSSNNMERLTLDSLVVQYLKHQHRQCPAPITTLPPLSLLHPHVC
PEPKRSLDAPSNVTARLGTREFRSVYGGVLGNRKDRQFVFSRFRPWRTCRDDNSGLLTCI
AFLGNSSHIAAGSHGGELKVFDTNTNSVLDSCTSHQPPLVLVQSHVSGDTQLLLSSSIQD
VRLWDASSIGNGPLHPFEGCKAARFSNSGSHFAALSSDLSNREILLYDIQTYQMELKLSD
TTFGSSGRAHMYSQIHFSPSDTMLLWNGVLWDRRVSGPVHRFDQFTDYGGGGFHPAGNEV
IINSEVWDLRKFRLLRSVPSLDQTAITFNARGDVIYAILRRNLEDVMSAVHTRRAKHPLF
AAFRTVDAVNYADIATIPVDRCVLDFATEPTDSFVGLITMDDQEEMLSSARVYEIGRRRP
TDDDSDPDDAESGEDEEEDDDDADVDPILGSGLDGDSDSDPDNMSNDDDSASDLDDDDEE
DGDFIMDGFDFDGGTGLLEIVTEGDDDDDDGSQLVESFSSDDEEDIVRNGFGF
NT seq
5742 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaccgacgaggcagcccgccgcggcggaggaggcgcggaacgaggaggaggag
gcggtggccaaggctcagagcctcatggacagggtcaccgcttctcccgacaatcccagc
cctgccctcctccacgctctctcctctctcctcgagacccacgagtgccgatacttggaa
cgaagtgatcagtcctccaataatgctcgctccactcacaccattgggcgcctcggcaac
ctactccgcgacaacgatgaattcttcgatttggtgtcttccaagtacctctgtgaaaat
accttctccacctcagtccaggcagctgctgctaggcttcttctggcctgttcgctcact
tgggtgtatccccatgtttttgaagatgatgctttggagaacataaaacgctgggtgatt
gatgagccggctgacgattctaagttcaagtttgatgctggtagaagggaggcctcggac
aatgatatgttgaggacctatgccaccggacttcttgcactctctttgtccaatggtggt
ccattggtggaggatgtgttgacttgtggactgtctgccaagcttatgcattatcttcgt
gtacgggtccttggagatgctggacagagagatactactcatctggcagagagcaaaagt
acttctgtgttgaattctgttagaggtagagaagaaagtcgggggagagtgcggcaggtt
gtggaagtgccgcattcagaggatgtcaggctgccagatgagagatgcttggaggatcaa
gcttctgaaagggaccaggatggaggcagtggttggcaagcatgtggagaagatagccga
attgctagggaaccacttgatagtctggtcaatgagaagtcaaaatctggagatcttgat
gaaagtggtagggatgaatcttcaaggcgtagaacacatcgtggatgggcaaaatcgaga
gggaaggggagggttggtgaaggagcggtggagaatgaacaagtcttgacctctccagga
tcgggtactcggttaggtgttgggaggagtattaaagacaagagctcctcaagacatgtt
gatgtgaaaaaagtacctgatacccggaaattagcaactcgaggtgctgatggtttgtcc
tcagaaagagatgatcttatggagctaattggagattgcaaagttggtagtcgagatatc
tctgatcttgtgaaggcagcagtcagagcagcagaagctgaagcgagagaagcaaatgca
cctgaagaagccattaaggcagccgctgccgccgctgctgaagtcgtcaaaagtgcagct
ttggaggcacttaataccaaaaatgatgaagaagctgcagtttcagcggcttcaagagct
gcatctacagttgttgatgctgctcgtgctgtagaagcctccaggaaatctatcaccgtt
gtggttgaatcgactgatcaaggtggtatggacgtaatagatgaagatgttgaatacttt
attcctgacatggagtccttggcacagctgcgagaaaagtactgcatccagtgcctagaa
cttttgggagaatatgttgaggttcttgggcctgtattgcatgagaagggtgttgatgtc
tgtcttgcgttgcttcagaggagctccaaatataaagagccttcgaagattgcggtgctt
tgccctgatgtgatgaagttaatatgtgctttggcagctcatcggaaatttgcagccctg
tttgtggacaggggtggcatgcaaaaactcctttctattcctagaattgctcaaaccttc
tttggtctttccttttgcttgtttactattggttcgattcagggcattatggaancagta
tgtgcccttccttcagatgttgtgcgccaagttgttgagttagccattcagcttctagaa
tgcccccaggatccgatggcacgaaagaatgcagccttgttttttgctgctgcttttgtt
ttcagagcggtccttgatgcttttgatgctctggatggtttacaaaaaatactaggtgtc
ttaaatgatgcagcctcagtaagatctggagttaattccatatcactaggactctccggt
tcaagttcacttcggaatgacaggtcacctccagaagtgcttacgtcatccgagaagcag
atagcttatcacacatgtgttgctttacggcaatattttagggcacatctactgttgatt
gtggattcaattcgtccatctaagactaaccgcaatgctccccggaatatttcgagcatg
agggcagcctacaaaccccttgacattagtaatgaggctatggatgctgtattcctacaa
ttgcagaaggatcggaagttgggtcctgcttttgtgagaacacggtggccagcagttgat
aagttcttagcctgtaatggacatttgaccatgttagaattgtgtcaggccccaccggtt
gagcgctatttgcacgacttgcttcaatatgccttgggtgttctgcacattgttacacta
gtacctcaaagtcgtaaaatgatagtgaatgctacattgagcaatgaacgtgttggcatt
gcagttgtattggatgctgcaaatattgctagtacttatgtcgatccagagatcatacag
cctgctttgaatgtgctaattaatctcgtgtgccctccgccttcaattagcaatagacct
cctatgcttgcacaaggtcagcagtctgctgcttcccaaagctccaatgcccttgccatg
gaatctagagatagaaatgcagaccgcagtatcacggatcggattgcttctgtggccatc
cagaatgatttaagggatcggaatggtgaatctagtggggttgatagaggttgcacaacg
tcatctgggactcaatctagcacagctcctttgacacctgtttctgcatcaacttcagga
ttggttggagatcgtagaatatctttaggtgctggagcaggttctgccggtcttgctgcc
cagctggagcaaggatatcgtcaagcaagagacgctgtccgtgctaataatggcataaag
gtccttctgcatctcctccagccacgaatatactcacctcctgttgctcttgactgcata
cgtgctctggcttgtcgtgttctacttggtttagccagagatgatacgattgcacacata
ttaacaaagctccaggttgggaaaaaactgtcagagctcattcgagattctggaagccag
acacttgggaatgagcagggtaggtggcaagctgaactagcccaggtcgccattgaacta
atagggattgtgacaaattcagggcgtgctagtacgttggcagctacagatgctgcaacc
cctaccttgaggcgcatagaacgagcagctattgccgctgccactcctattacttaccac
tccagggaacttttactccttatccttgaacatctgcaagcgtgtggtttgggtgggagt
gctgctatgctgcagaaagaggctcaactgactcctctcccatcgactgtggtcccagca
tctctttcatatacagcaggcacccaagaatctgcctctgtacagtttcagtggccatgt
ggtcgcaccccacgtggatttctatctgaaaagttaagattctctgaacataatgatatt
tccagattgagatgtgactcagcaggatcttcaatacggaagaaaccgctggttttctca
cctagttttggttcacaatcaaggcagctgtctttccatgatgggagttcacaacttaat
aagaagctatccagtgtcataaaaccacctgcacaagtaattgtacgtgaaactccatcg
gaagctatggggaaatcttttgtagatactgatccccagtgtaagactcctatcattttg
ccaatgaagaggaaacaccatgagataaaagatagtggctttgcaatacctgggaagagg
ttacaaactgctgagcatgggctgtgctcccctgcttgtgtaacacctcattccttccgt
agaaatggtacatcaactgatccctctgggttttccacaccaaactcaactaacagggac
ttacatgaccgatcaacatgtcttttatctgatgtggatgacagtccatatgttaattgt
caaacaggtcacatgactttcactgaccatgggttactgaatgatccccattctagcaat
aacatggagaggttaactctggattctctggttgttcaatatctgaagcaccagcatcgg
cagtgtcctgctccaattactactcttccacctctctcactcttacacccacatgtttgc
cctgaaccaaagcggagtcttgatgctccatcaaatgtaacagcgcgtcttggcacacgg
gagttcagaagtgtgtatggtggagtccttggaaatcgcaaagatcgtcaatttgttttc
agtagatttagaccatggcgaacatgccgagatgacaatagtggtctcttgacttgcata
gcttttcttgggaactcttctcatattgcagctggtagccatggtggagagctcaaagtc
tttgacaccaataccaatagtgtcctagacagctgcacaagccaccagcctcctttggtg
cttgttcagtcacatgtctcaggcgatacacagctgctgctctcatcaagtattcaggat
gttcgcttgtgggatgcctcttctatagggaatggaccattacatccatttgaagggtgc
aaggctgctaggtttagcaattctgggagccattttgctgcattatcatcagatttaagc
aatagagagattctcttgtatgatatccagacctatcagatggagctaaaattgtcggac
acaacttttggttcttcaggtcgggcgcatatgtattctcagatacacttcagtccatca
gatacaatgttgctctggaatggtgtattatgggatcggcgagtttctggccctgttcat
cgattcgatcaattcacagactatgggggtggtggctttcatcctgctggcaatgaggtc
ataataaactctgaggtgtgggatctacggaaattcagactgctccggagtgttccttcc
ctggatcaaacagcaataacatttaatgcacgtggtgacgtaatttatgcaatcttgagg
agaaaccttgaggatgtaatgtctgctgttcatactcgtcgtgccaagcatcctcttttt
gcagcatttcgcacagttgatgcggtcaactatgctgacattgcaactattccagtagat
cgctgcgtccttgactttgcaacagaaccgacggattcatttgtggggttgatcacaatg
gatgatcaagaagagatgttatcttctgcgagggtctatgagattggtcgacggaggccg
acggacgacgactctgatcctgatgatgctgagagcggggaagatgaggaagaagatgac
gacgatgctgatgtagatcctatattgggctcgggtctagatggtgatagtgatagtgac
cctgataatatgagcaatgacgatgatagtgcgagtgatcttgatgacgatgatgaggaa
gatggggattttataatggatggttttgactttgatggtggaactggattattggaaatt
gtgacagagggagatgacgacgacgatgatggaagtcagctggttgaatctttcagtagt
gatgatgaagaggatatcgtgcgcaatggctttggcttctaa
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integrated database retrieval system
