KEGG   Eucalyptus grandis (rose gum): 104438483
Entry
104438483         CDS       T03547                                 
Name
(RefSeq) protein SMG7 isoform X1
  KO
K14409  protein SMG7
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    104438483
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:egr03019]
    104438483
Messenger RNA biogenesis [BR:egr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     104438483
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     104438483
SSDB
Motif
Pfam: EST1_DNA_bind EST1
Other DBs
NCBI-GeneID: 104438483
NCBI-ProteinID: XP_010049945
UniProt: A0A059CX64
LinkDB
Position
3:66060062..66068000
AA seq 1042 aa
MIIKTDNMPAPSWERAQRLYEKNIELDNRRRKSAQARIPSDPNVWQQMRENYEAIILEDH
TFSEKHNIEHALWQLHYKKIEELRAHFSAAQASANPNASVNGKGPSSRPDRITKIRLHFK
NFLSEATGFYHDLILKIRSKYGLSLGYFAEDVDSRLLSEKDGKNSADVKRVLISCHRCLI
YLGDLARYKGLYGEPDSKSREYAAASSYYLQAASLWPSIGNPHHQLAILASYSGDDLLTV
YRYFRSLAVDSPCSTARDNLIVAFEKNRQSFSLLHGDAKSSMVRSAGKVRGQQAKLASRD
AEAATFKESNSNTHDTYNSLCIHFVRLNGILFTRTSSETFVEVLSSVVTGLCDLMSSGPE
EEMSFGNDAVENGLFFIRLVSILIYTIHNVKRESEGQSYAEIVQRAVLLQNALTAVFDIM
GLVMERCEQVRDPSLSYLLPGILVFVEWLASYPDVAMGGDVDEKQATVRSNLWIHYVSLM
NKLLSIGSMSIDDCDDESCFDNMSRYEEGETGNRLALWEDFELRGFLPLVPAQTILDFSR
KHSFGSEGIKEKNARVKRTLAAGKVLVGGVKINNKTVWYDSKAKKFVVGVESQLSAEDIH
PPDSTVPKANDMLLENGAQMAVKTEEFQSNSQLYVEGEEEDEEIVFKPTAAEKQTDTAVQ
YMVSSKMLEPQKNAFGNDQPFPVFKPTAAEKQTDTAVQYMVSSKMLEPQKNAFGNDQPFP
VFKPTAAEKQTDTAVQYMVSSKMLEPQKNAFGNDQPFPVASMAAPPDNSLHLTSSDAFSW
NPISAGNLQPITSHTSNWLTEETMLSNGFKDLKMLEKGHLAHSEINENATNFFPAVNSFP
IRQSATSSDSLFLNQANAPDAMVPSPIYNSFMSSGVNVDALAVKPSSTSPVVLKKKPVAR
PLRHLGPPPGFNAVPKQANGPFSGLDLTHQNQMLDDYSWLDGYQMSSGFRGLVNNSNSYS
SFANLPPISGSAASIGTVSFPFPGKQVPSVHQMEIHKGWYDHETLDHQKQMQQPQQIING
NPQLGPLPEQYQGSVWPDHHFV
NT seq 3129 nt   +upstreamnt  +downstreamnt
atgatcataaagacggataatatgcctgctccatcctgggagcgtgcacaacgactctat
gaaaagaacattgagttggataataggcgtcggaagtctgcccaggcacgaattccatct
gacccaaatgtatggcaacagatgcgtgagaactatgaagcaataattcttgaggatcat
acattttcagagaaacacaatatcgagcatgctctatggcaattgcattacaagaaaatt
gaggaattgagagcacacttcagtgctgctcaagcatctgcaaatccaaatgcatcagtc
aatgggaaaggaccctcctctcgtccagatcgaataacgaaaataagattgcattttaag
aattttctttctgaagcaactgggttctaccatgatttgatcttgaaaatcagatcaaag
tatggtctttctcttggttacttcgctgaggatgtagacagcagacttttgtccgagaaa
gatggaaaaaattcagcggatgtaaaaagggttttgatatcttgtcaccgttgcttgatt
tacttgggcgatcttgcacgctacaaaggtctgtatggagagcctgactcaaaatctcgt
gagtatgcagcagcttcaagttattatctccaagctgcatctctttggccatctattggg
aatccccatcatcagctggcgattttagcttcttattctggggatgatttgcttactgtg
taccgatatttccggagtttggctgtcgacagcccatgttctactgcaagggacaacttg
attgttgcctttgaaaagaatcgtcaaagtttctctctactgcatggggatgctaaaagt
tctatggtccggtctgctggaaaagtgagaggacagcaagccaagcttgcatctagagat
gctgaagctgcaactttcaaagaaagtaattccaacacccatgatacctacaactcactt
tgcatccactttgtccgtctaaatgggattctgttcactcgaacaagctcggagaccttc
gtggaagtcctctcttcggttgtcactggtttatgtgatcttatgtcttctgggccagaa
gaagagatgagttttggcaatgatgctgttgagaatggtcttttctttatcaggcttgtg
tctatccttatatatactattcataatgtgaaacgcgagagtgaaggccagagttatgca
gaaattgttcagcgtgctgtactccttcagaatgcattgactgcggtttttgacatcatg
ggactagttatggagagatgcgaacaagttcgtgatccttctttgagttacctcttacct
ggcattttggtctttgtggaatggttggcatcttatcctgatgttgccatgggtggcgat
gttgatgagaagcaggcaactgttagatcaaatttgtggattcattacgtctctcttatg
aataagcttttgtcgatcgggtcgatgtccatagatgactgtgatgatgaaagttgcttt
gataacatgagcagatatgaagaaggggaaactggaaaccgccttgctttgtgggaagat
tttgagttgagaggatttctgccgcttgttcctgcacaaaccattttggacttttcaaga
aagcattcttttggaagtgaagggatcaaggaaaagaatgctcgtgttaaaagaactctt
gcagctgggaaagtgcttgtaggaggggttaaaatcaataacaaaacagtttggtatgac
tcaaaggctaagaaatttgtcgttggcgttgagagtcaactgtcagcagaggatattcat
cctcctgattctactgtgcctaaggcaaatgacatgttgctagaaaatggagcacaaatg
gctgtgaaaacggaggagttccagtcgaattctcagctatatgtggagggggaagaggag
gatgaagagattgtttttaagccgacggcagcagagaagcaaacagatactgctgttcaa
tatatggtctcttctaagatgttggagccacagaaaaatgcctttggaaatgatcaaccc
tttccagtttttaagccaacagcagcagagaagcaaacagatactgctgttcaatatatg
gtctcttctaagatgttggagccacagaaaaatgcctttggaaatgatcaaccctttcca
gtttttaagccaacagcagcagagaagcaaacagatactgctgttcaatatatggtctct
tctaagatgttggagccacagaaaaatgcctttggaaatgatcaaccctttccagttgct
tctatggcagcgcctcctgataactctctgcatttgacctcttcagatgctttttcatgg
aaccccatttctgctggtaatctacagcctatcacatctcatacttcaaattggttgaca
gaagaaactatgctgtctaatggcttcaaagatctaaagatgctggagaaagggcatctg
gcgcattctgagatcaatgagaatgccaccaactttttccctgccgttaattcatttccg
atcagacagtctgctactagtagcgacagcttgtttttgaatcaggcaaatgctccagat
gccatggttccttcacccatatataattctttcatgtcttctggagttaatgttgatgct
ttggctgtgaagccatcatctacttctcctgtagttttaaaaaagaaaccagttgctagg
ccactcagacatcttggccctcctcctggttttaatgctgttcctaagcaggccaatgga
cccttttctggattagacttgacccatcagaaccaaatgttggatgattatagctggttg
gatgggtatcagatgtcttccggattcaggggcctagtgaacaattccaatagttattca
tcttttgcaaacttaccacccattagtggcagtgctgcttcaattgggaccgttagcttc
ccgtttccgggaaagcaagttccatcagtccaccaaatggaaattcataaaggctggtat
gatcacgagactctggatcatcagaagcagatgcagcaacctcagcaaataattaatggg
aacccacagctcggtcctttgccagagcagtaccaaggatcagtctggccagatcatcat
tttgtgtga

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