Eucalyptus grandis (rose gum): 104439870
Help
Entry
104439870 CDS
T03547
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr00040
Pentose and glucuronate interconversions
egr01100
Metabolic pathways
Module
egr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104439870
Enzymes [BR:
egr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104439870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
104439870
NCBI-ProteinID:
XP_018725780
LinkDB
All DBs
Position
3:52021657..52029206
Genome browser
AA seq
456 aa
AA seq
DB search
MGTNRYRGDNILVCFNRTIGTWKGFVAAIYLVLFAAPSTFSSHGIVAASPIYNVINYGAI
GNGVDDDTQAFVKAWGDSCGDSGARGTPTLVVPGGKKFKLSPVSFKGPCKSSSFIVKIDG
TLVAPSSPSEWKGCSADSWLVFQDVANLNVKGSGQVDGQGSLWWGGAKNRPTALSFFHCI
NLVLSGLQHINSPKNHISISGCDGGTISNLRISAPETSPNTDGIDISSTNHLNIQELNIQ
TGDDCIAINGNSSYITITGVSCGPGHGISIGSLGEHGISDTVEGVQVQHCTFTGSTNGAR
IKTWQGGSGYAKGITFDQITLNAVKNPIIIDQFYTNEVAQDNLASSVAVSNVTYTGFRGT
SASDQAIILSCSSIGCLDIRLDNNMITSSTPGKTVTSWCKNAHGSATLTTPRGFEIPAVV
VNAAFGEGIADPPDEAVEDPVPPEPVEFERSVNMSD
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggggactaatcgctatcgtggggataacattctagtgtgctttaataggacaattgga
acttggaagggatttgtagctgcaatatacttggtcctcttcgctgctccgtcaactttt
tcaagccatggaatcgttgcagcatcacccatctacaatgtgataaactatggtgcaatt
ggaaatggagtcgatgatgatacccaggcctttgtgaaagcttggggagatagttgtgga
gacagcggagcacgaggaacgccaactttagttgttcctggtgggaagaagtttaaacta
tctcctgtctctttcaagggcccgtgcaagtcttcaagctttatcgtaaagattgatggg
actttagttgctcctagttcaccaagtgaatggaaaggctgctcagcggatagctggttg
gttttccaagacgtggccaatctcaatgtcaaaggatcaggacaagtcgacggccagggt
tcactttggtggggtggagctaagaatagaccaactgccctgtccttttttcattgcatc
aatctagtgctaagtggactgcaacacattaacagtccaaagaatcacatctctatcagt
ggctgtgatggcggtaccatctccaatctccgaatttctgcacctgaaactagccctaac
acagatgggatcgacatttctagcaccaaccaccttaacatccaagaacttaatattcaa
acaggggatgattgcattgctataaatggtaactccagctacattactatcactggagtt
tcatgtggacctggccatggtataagcattggaagcttaggtgaacatggaatcagtgac
acggtcgaaggggtacaagtgcagcattgcacattcactggatctacgaatggagcgagg
atcaagacttggcagggaggttcgggatacgccaagggtattacttttgatcaaatcacg
ctcaacgcagtgaagaatccaatcatcatcgaccaattttataccaatgaagtagctcaa
gataatttggcatcgagcgtggcggtgagcaacgtgacgtataccggctttcgggggacc
agtgcttcggatcaagccatcatactcagttgttccagcataggttgcctggatatcaga
ttggacaacaatatgatcacatcatcgacgcctgggaaaacggtcacttcctggtgcaag
aatgcccatggatcagctactttgaccacacctcgaggttttgagattcccgctgtggtt
gtcaatgctgcttttggcgagggtatagctgaccctcctgatgaagctgtggaggacccg
gtgcccccagagccggtggagtttgaaagatctgtgaacatgtccgactag
DBGET
integrated database retrieval system
