Eucalyptus grandis (rose gum): 104439871
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Entry
104439871 CDS
T03547
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr00040
Pentose and glucuronate interconversions
egr01100
Metabolic pathways
Module
egr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104439871
Enzymes [BR:
egr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104439871
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GFIT
Motif
Pfam:
Glyco_hydro_28
NosD
Motif
Other DBs
NCBI-GeneID:
104439871
NCBI-ProteinID:
XP_039165703
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Position
3:52038875..52043224
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AA seq
324 aa
AA seq
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MTCKGMIAFVKAWEDTCGDSGEKGTPTLAVPGGKKFRLSPVAFKGPCKSSSINVQIDGTL
VAPSSLSGWKGCSSGKWLNFQDVANLNVKGSGQVDGQGSPWWDGAEGPDGCENRPTALAF
SQCVNLVLSGLKHVNSPRNHISISGCDNGIVSNLQITAPESSPNTDGIDISHTNNLDIHD
LDIQTGDDCIAINGGSSNISITRVSCGPGHGVSIGSLGKNGAYETVEQVQVRDCSFSGTT
NGVRIKTWQASGVVVSDVTFTGFRGSSASDQAIKLSCSSVGCSDITLDNVQITSSKPGDT
VTASCENAHGSATLTTPPVRCLGS
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgcaaggggatgattgcctttgtgaaagcttgggaagacacatgtggagacagc
ggagaaaaaggcacaccaactttagctgttcccggtgggaagaagtttagactatctcct
gtcgctttcaaaggcccatgcaagtcttcaagcattaacgttcagattgatgggacttta
gttgctcctagttcactaagtggttggaaaggctgctcttcgggtaaatggttgaatttc
caagacgtggccaatctcaatgtcaaaggatcaggacaagtcgatggccagggttcacct
tggtgggatggagctgagggaccggatggctgcgagaatagaccaactgccttggccttt
tctcagtgcgtcaatctggtcctaagtggactgaagcacgttaacagtccaaggaaccac
atctccatcagtggttgtgataatggtatcgtctccaatctccaaataaccgcacctgaa
agtagccctaacacagatggaatcgacatttctcacaccaataaccttgacattcacgac
ctggacattcaaacaggggatgattgcatcgctataaatggtggctccagcaacattagt
atcaccagagtttcatgtggacctggccatggtgtaagtatcggaagcttaggaaagaat
ggagcttacgagacagtcgagcaggtacaagtgcgggattgcagcttcagtggaactacg
aatggagtgaggatcaagacttggcaggcatccggcgtggtggtgagcgacgtgactttc
accggttttcgagggagcagtgcttcagaccaagccatcaaactcagctgttcgagcgta
ggttgctcggatatcacattggacaacgtccaaataacatcatcgaagcctggagatacg
gtcactgcctcgtgtgagaatgcccatggatcggctactttgaccacacctcctgtgcgt
tgcttaggtagttag
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