Eucalyptus grandis (rose gum): 104439872
Help
Entry
104439872 CDS
T03547
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr00040
Pentose and glucuronate interconversions
egr01100
Metabolic pathways
Module
egr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104439872
Enzymes [BR:
egr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104439872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
104439872
NCBI-ProteinID:
XP_010051184
LinkDB
All DBs
Position
3:52048398..52058453
Genome browser
AA seq
495 aa
AA seq
DB search
MESGLIKVISQDVVKQDRTSKRGEVAGEAIHNVECADQDVGLSRQGNMDHFFAASSALII
AALLEISILYYLMASIFLALNGNTAMFLRNASLGYFGFVAAIYLVLFAASSTFSSHGIVA
ASPTYNVVNYGATGSGDDDDAQAFVKAWEDTCGDSGEKGTPTLAVPGGKKFRLSPVAFKG
PCKSSSINVQIDGTLVAPSSLSGWKGCSSGRWLNFQDVANLNVKGSGQVDGQGSLWWDGA
KGGCEKRPTALGFLNCINLVLSGLHHVNSPRNHISIINCHNGIISNLHITAPESSPNTDG
IDISRSNNLDIHDLDIQTGDDCIAINGGSSNISITRVSCGPGHGISIGSLGKNGAYKTVE
QVQVRDCTFRGTTNGVRIKTWQGGSGYAKNIIFNQIKLDAVSNPIIIDQFYNPGGAQLNE
ASSVVVSDVSFTSIRGTSASDQAITLSCSSVGCSDITFDNVDITSSKPGDTVTASCENCH
GSATLTTPPVPCLNH
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggggttgatcaaagtcataagtcaagatgtggtgaaacaagatcgcacgagc
aagagaggtgaagttgccggcgaagccattcacaatgtagagtgcgctgaccaggatgtg
ggacttagtcgccaggggaatatggatcattttttcgctgcctcctccgctctcattatt
gcagcgctattagagatctcaatattatattatttgatggcatcgatattcttagcactg
aatgggaacactgcaatgtttcttcggaatgcgtctcttggttattttggatttgtggct
gcaatatacttggtcctcttcgctgcttcgtcaactttttcaagccacggaattgttgca
gcatcacccacatacaatgtggtaaactatggcgcgactggaagtggagacgacgatgat
gcccaagcctttgtgaaagcttgggaagacacatgtggagacagcggagaaaaaggcaca
ccaactttagctgttcccggtgggaagaagtttagactatctcctgtcgctttcaaaggc
ccatgcaagtcttcaagcattaacgttcagattgatgggactttagttgctcctagttca
ctaagtggttggaaaggctgctcttcgggtagatggttgaatttccaagacgtggccaat
ctcaatgtcaaaggatcaggacaagtcgatggccagggatcgctttggtgggatggagca
aagggaggctgcgagaagcgaccaactgccttgggctttttaaattgcatcaatctggtc
ctaagtggactgcaccacgttaacagtccaagaaaccacatctccatcattaattgtcat
aatggtatcatctccaatctccatataaccgcacccgaaagtagccctaacacagatgga
atcgacatttctcgctctaataaccttgacattcacgaccttgacattcaaacaggggat
gattgcatcgctataaatggtggctccagcaacattagtatcaccagagtttcatgcgga
cctggccatggtataagtatcggaagcttaggaaagaatggagcttacaagacagtagag
caggtacaagtgcgggattgcaccttcaggggaactaccaatggagtgaggatcaagact
tggcagggaggttcgggatatgccaagaatattattttcaatcaaatcaagctcgacgca
gtgagtaacccaatcatcatcgaccaattttataatcccggaggagctcaactgaatgag
gcatccagcgtggtggtgagcgacgtgagtttcaccagcattcgagggaccagtgcttca
gaccaagccatcacactcagctgttcgagcgtaggttgctcggatatcacatttgacaac
gtcgacataacatcatcgaagcctggagatacggtcactgcctcgtgtgagaattgccat
ggatcagctactttgaccacacctcctgttccttgtttaaatcattag
DBGET
integrated database retrieval system
