Eucalyptus grandis (rose gum): 104441022
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Entry
104441022 CDS
T03547
Name
(RefSeq) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104441022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egr03400
]
104441022
DNA repair and recombination proteins [BR:
egr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104441022
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
AAA_22
ANGPTL8
Motif
Other DBs
NCBI-GeneID:
104441022
NCBI-ProteinID:
XP_010052322
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All DBs
Position
4:complement(12380817..12388434)
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AA seq
934 aa
AA seq
DB search
MELTTARFLCPVSFPPNLSFPPYSSPGRPAVPLAVVAAAAAAAAASDSDDSHHPRRPSLA
QALQSETLKTLEWSSVCRQLSSFASTSMGLVATRDADVPIGETPAASRRLLDQTAAAVLA
AESRRWDLSGIEDVSAVVESARKGELLTIGEICAVRRMLSAARKVGEELEATAVAGGRDS
FGRYAPLLKILYDCDFCTDLQRKIEYCIDCNLSIILDRASEDLEIIRSERKSNMEKLDSL
LKEVSAHVFRAGGIDKPLITTRRSRLCVGIRASHRYLLSDGVVLSVSSSGATYFMEPKEA
VELNNMEVRLSNAEREEEIAILSLLTSEIADAGIQIKHILDRVLEIDLAFARASHAQWID
GVCPTLSSDHSDGSCDAEAVRLVDIENIRHPLLLEPSLGHSTDVAASNSMDFANVNNSRR
GLSSRDNSGVSSDFPVPVDMKIEQGTKVVVISGPNTGGKTASMKTLGLAALMSKAGMYLP
AKGSPRIPWFDLILADIGDHQSLEQNLSTFSGHISRICKILDVASAESLVLIDEIGSGTD
PSEGVALSASILQYLKNRIHLAVVTTHYADLTLLKKKDAQFENAAMEFSLQTLEPTYRIL
WGSTGDSNALNIAKSIGFDGEIIERAKQWVERLRPERQQERKGLLYQSLLEERDRLKAQA
EKAASLHVEVMNLYQEILHEAEDIDNRLKALMAKEMHHAQEERKATEMQIQAVVEEFENN
LEDASPDQLNSLVRKCESSIASILEAHQPSELDFPDRSDDALFVPQYGEQVHVKGLGNKL
ATVVEETGDDDTVLVQFGKVRVRVNKNDVRAVANSRRSRASSSIPQLRRKSQNNNEELQN
QVEGNKDEGSLYGPLLQTSKNTVDLRGMRVEEAALELDMAISSRGSYSVIFIIHGMGTGA
VKERVLEILKNHPRVAKYEQESPLNYGCTVAYIN
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggaactcaccaccgcccgcttcctctgccccgtctccttcccgccgaacctctccttc
ccgccgtactcctccccgggacggcccgccgtccctctcgccgtcgtcgccgccgccgcc
gccgccgccgccgcctccgactccgacgattcgcaccaccctcgccgcccttccctagct
caggcgctccaatccgagacgctgaagaccctggaatggagctccgtctgcaggcagctc
tcctccttcgcctccacctccatgggactcgtcgccacgcgggacgccgacgtcccgatc
ggagagaccccggcggcgagccggaggctcctggaccagaccgccgcggcggtcctcgcg
gcggagtcgcgccggtgggacttgtccgggattgaggacgtgtcggcggtcgtggagtcg
gcgaggaagggggagctgctcacgataggggagatatgcgcggtgcggaggatgctgagc
gccgcgaggaaggtgggggaggagctcgaggcgacggcggtggcgggcggccgtgattct
tttgggaggtacgctccacttctcaaaattctctatgactgtgatttctgcacagaccta
caacggaagatagaatattgcatagattgcaatctctcaataatccttgatagagctagt
gaagatctagagatcatcagatctgaaagaaagagcaacatggaaaagttggattcattg
ttgaaagaagtgtcagctcatgtttttcgtgctgggggcattgacaagcctctaattacc
acacgccgttccaggctttgtgttggtattagggcctcgcatagatatttactttcagac
ggagttgttcttagtgttagcagttctggtgccacatactttatggaacctaaagaggca
gttgagttgaacaacatggaagtgaggctgtcaaatgctgaaagggaggaagagatagca
attttaagcctgcttacttctgaaatagcagatgcagggatacaaataaagcacatattg
gatagggttcttgaaatagatctggcatttgctagagcttctcatgcccagtggatcgat
ggagtctgtccaactttaagttcagatcattctgatggctcatgtgatgctgaagctgtt
agactagttgatattgaaaatattcgacatccattgcttcttgagccatcacttgggcat
tccactgatgtagctgcatccaattccatggactttgctaatgtaaataacagcaggagg
gggctatcatctagagataactcaggagtcagttctgattttcctgtgcctgtagacatg
aaaatcgagcaaggaaccaaagtagttgtgatctctgggcctaatacaggaggcaaaact
gcttccatgaaaactttgggcctagcagctctgatgtctaaggctggcatgtatttgcct
gctaagggttccccgaggattccatggttcgatctgattctcgcagatattggagaccat
cagtccttggaacaaaatctttcaacctttagcgggcacatatctcggatatgcaaaatc
ttagatgttgcctcagcagaatcacttgtcctcattgatgagattggtagtggaactgac
ccctcagaaggtgtggcactttctgccagcatcttgcaatatctcaagaatcgtattcat
ttagctgttgttactactcattatgcggatttaacccttctgaagaaaaaggatgcgcag
tttgagaatgcagctatggaattctcattgcaaaccttggaacctacttatcggattctc
tgggggagtactggtgattcaaatgcattgaatattgcaaaatcaattggattcgatggg
gagataattgaaagagcgaaacaatgggtggagaggttaagaccagaaaggcagcaagag
cggaaaggtttgctatatcaatctttgctggaggaaagagaccgtttgaaagcccaagct
gagaaggctgcatctcttcatgttgaggtcatgaatctttatcaggagatcctgcatgag
gcagaagacattgataaccgtctgaaagctcttatggcaaaggaaatgcatcatgcccaa
gaagaacgaaaggcaacagaaatgcaaatacaagcagtggttgaagagtttgaaaataac
cttgaagatgccagtcctgatcagcttaattcacttgtcaggaaatgtgaatcctcaatc
gcatctatcttagaagctcatcaacctagcgaactagattttcctgatagatcggatgat
gctttgtttgtgccacagtatggggagcaggtccacgtcaagggactgggtaataaatta
gctactgttgttgaagaaactggggatgatgacactgtccttgtccaattcggtaaagta
agagtccgggtaaacaagaatgatgttagagctgttgccaatagtaggaggagtcgagct
tccagttccatcccacagttaaggaggaagtcacagaataacaatgaagagctccagaat
caagtcgagggaaacaaagatgaaggctctttgtatggaccattattgcagacatcaaag
aacactgtggatcttcgaggcatgcgagtcgaggaagctgctcttgaacttgacatggcc
atttcttctagaggctcgtactctgtcatcttcatcattcatggtatgggtactggagct
gttaaggaacgggtccttgagatattgaagaatcatccccgagttgccaagtatgaacag
gaaagtccactgaattatggatgtacagttgcatatattaactga
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