Eucalyptus grandis (rose gum): 104441079
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Entry
104441079 CDS
T03547
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104441079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
egr04121
]
104441079
Ubiquitin system [BR:
egr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
104441079
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
LRR_6
F-box-like
LRR_8
F-box
Motif
Other DBs
NCBI-GeneID:
104441079
NCBI-ProteinID:
XP_010052384
UniProt:
A0A059CDK7
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Position
4:13441898..13448551
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AA seq
584 aa
AA seq
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MDPTKKPRESSSSTASAAAAEFPDEVLERVLALLASHKDRSAASLVSKAWYHAERWSRTR
VFIGNCYSVTPEIVAGRFPKIRSVTLKGKPRFSDFNLVPQNWGADIRSWLTVFAERYPFL
EELRLKRMTVTDESLKFLALKFPNFRALSLMSCDGFSTDGLAAIATRCRNLTELDIQENG
IDDISGDWLSCFPENFTSLEVLNFASLNSDVDFDALERLVSRCNSLKVLKVNRTISLDQL
QRLLVRAPRLTELGTGSFLQELNAHQYSELERAFGGCKTLHTLSGLYEAMAPYLPVLYPA
CANLTFLNLNDAALQNEELAKLVVHCPCLQRLWVLDTVGDEGLGAVARSCPLLEELRVFP
ANPFDEEVNHGVSESGFLAISYGCRRLHYVLYFCRQMTNAAVATIVQNCPDFTHFRLCIM
NPGQPDYLTNEPMDEAFGAVVKRCTKLQRLAVSGLLTDQTFEYIGTYAKNLETLSVAFAG
SSDRGMQCVLRGCPKLRKLEIRDCPFGNAALLSGLEKYESMRSLWMSACKVTMNGCAVLA
RERPRLNVEVMKDEESSDGQAYKVYVYRTVAGPRRDAPPFVLTL
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggatccgacgaagaagccgcgggagtcgtcctcgtcgacggcgtcggcggcggcggcg
gagttcccggacgaggtgctggagcgggtgctggcgctgctagcctcgcacaaggaccgg
agcgccgcgtccctcgtgtccaaggcctggtaccacgccgagcggtggtcccggacgcgg
gtcttcatcgggaactgctactcggtgacgcccgagatcgtcgccggccggttcccgaag
atccgcagcgtcacgctcaaggggaagcccaggttctcggacttcaacctggtgccgcag
aactggggggccgacatccggtcgtggctcacggtcttcgcggagcggtaccccttcctc
gaggagctgcggctcaagaggatgaccgtgacggacgagagcttgaagtttctggccctg
aaatttccaaacttcagggctctctcgctcatgagctgtgatgggttcagtaccgatggt
cttgcggccattgcgactcgctgcaggaatttgactgagctggatatacaagagaatggc
attgatgatattagtggtgactggttgagttgcttccctgagaacttcacatctttggaa
gtgctgaacttcgcaagtctaaatagcgatgttgattttgatgctcttgagcggcttgta
agtcggtgcaattcactgaaggtccttaaggttaatagaactatttcactagatcagtta
cagaggctgcttgtccgtgctcctcggttaactgagctcggtactggctcgtttttgcaa
gagcttaatgctcaccagtactcagagcttgaacgagcttttggtggctgcaagactcta
cacacgctctctggactatatgaagctatggcaccatatctcccagttctatacccggcc
tgtgcaaatttgactttcctgaatttaaatgatgctgctttgcaaaatgaagaacttgcc
aagcttgttgttcactgtccatgtcttcagcgcctctgggtacttgacactgtgggagac
gaagggctgggagctgttgcgcggagttgtccactcctagaggagcttcgggtcttcccg
gccaacccttttgacgaggaagttaatcatggtgtttccgaatcagggtttcttgccatt
tcatatggctgccggagacttcactatgtactctacttctgccgtcagatgacaaatgca
gctgtagccacaattgtgcagaactgccctgattttacacacttccgtctttgcataatg
aacccagggcaacctgattatctgacaaatgaacctatggacgaggcttttggtgcagtt
gtgaagaggtgtacgaaactccagaggcttgctgtttcaggtctcctaactgaccagaca
tttgagtatattgggacatatgctaaaaatctggaaacgctttctgtagcttttgctgga
agcagtgaccgggggatgcagtgtgtgctgaggggttgtccaaagttgagaaaacttgaa
atcagggattgtccatttggtaatgcagctcttctctcgggattggagaagtatgagtct
atgaggtcgttgtggatgtcggcctgcaaagtgacaatgaatgggtgtgcggtattggct
agggagaggcctagattgaatgttgaagtaatgaaggatgaggagagcagtgatggtcag
gcatataaagtttatgtttaccgcactgttgctggaccaaggagagatgccccacctttt
gttcttactctctga
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