Eucalyptus grandis (rose gum): 104441080
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Entry
104441080 CDS
T03547
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104441080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
egr04121
]
104441080
Ubiquitin system [BR:
egr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
104441080
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Motif
Pfam:
Transp_inhibit
F-box_5
LRR_4
LRR_At5g56370
LRR_6
F-box-like
LRR_8
F-box
Motif
Other DBs
NCBI-GeneID:
104441080
NCBI-ProteinID:
XP_010052385
UniProt:
A0A059CDA5
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Position
4:13450380..13457980
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AA seq
580 aa
AA seq
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MDPSKSRDSAESTRVIQFPNDVLERILSLIDSHRDRNAVSLVSKAWYNAERWTRRHVFIG
NCYAVSPQIVARRFPNIRSVMLKGKPRFSDFNLVPPNWGADVHGWLAVFADQYPQLEELR
LKRMTVTDESLKFLARKFHNFRVLSLLSCDGFSTDGLEAIATDCRHLTELDIQENGIDDI
SGNWLSCFPENFTSMEVLNFASLSSDVNFDALERLVSQCKSLKILKVNKSITLEQLQRLL
VRAPQLTELGTGSFLQELTAHQNEELERAFIGCKYLHALSGLWEATTLYLPVLYPACTNL
TFLNLSYAALQSEELAKLVAHCPRLQRLWVLDTVEDVGLEAVASSCPLLEELRVFPADPY
DQDINRGVTESGFLAVSLGCRKLHYVLYFCRQMTNAAVARIVQNCPGFTHFRLCIMKPGQ
PDYLTNEPMDEGFGAVVKTCTNLRRLGVSGLLTDLTFEYIGRYAKNLETLSVAFAGGSDL
GMKSILVGCPKLRKLEIRDCPFGNEALLSGLEKYESMRSLWMSACKVTLHGCKTLATQRP
RLNVEVMKDEEIDDGQSYKVYVYRTVAGPRTDAPSFVHTL
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggatccgagcaaatcgcgcgactcggcggagtcgacccgggtgatacagttcccgaac
gacgtgctggagcggattctgtccctcatagactcgcaccgggaccggaacgccgtctcc
ctcgtctccaaggcgtggtacaacgcggagcggtggacgcggcggcacgtcttcatcggc
aactgctacgcggtgtcgccgcagatcgtggcccgccggttccccaacatccgcagcgtc
atgctcaaggggaagccccggttctcggacttcaacctggtgccgcccaactggggtgct
gacgtgcacgggtggctcgcggtcttcgcggatcagtacccgcagctcgaggagctgagg
ctcaagcggatgaccgtgacggacgagagcttgaagttcttggctcgcaagttccataat
ttcagggtgctctcgctcctgagctgcgatgggttcagcaccgatggtctcgaggcaatc
gcaaccgactgcagacatttgactgagctggatatacaagagaatgggattgatgatatc
agtggcaactggttgagttgcttccctgaaaacttcacatctatggaggtgctgaacttt
gcaagtctaagtagtgatgtgaattttgacgctcttgagaggcttgtaagtcagtgcaag
tcactgaagattttgaaggttaataaaagtattacgctagaacaattacagaggctgctt
gtccgtgctcctcagttgaccgagcttggtactggttcgtttttacaagagcttactgct
caccagaacgaggagcttgaaagagctttcattggttgcaagtatctgcatgcactctcc
ggcttgtgggaagctacgacactatatctacctgttctttacccagcctgtacaaatttg
acttttctgaatttaagttatgctgctttgcaaagtgaagagcttgccaagcttgttgcc
cactgtccacgtcttcagcgtctctgggtacttgacactgttgaagatgtaggacttgag
gctgttgcctcgagttgtccccttttagaggagcttcgagtcttcccagctgatccttat
gaccaggacattaatcgtggtgtgactgaatcggggtttcttgctgtgtcgctcggctgc
cgcaagctccactatgtcctctacttttgccgtcagatgacaaatgctgctgtagccaga
attgtgcagaactgccctggttttacccactttcgtctttgcataatgaagccggggcaa
cctgattacctaacaaatgaacctatggatgagggttttggtgcagttgtgaagacttgc
acaaatctccgaaggcttggcgtttctggtcttttgactgacttaacgttcgagtatatt
ggaagatatgctaagaacttggaaacactttctgtggcttttgctggcggcagcgatctc
gggatgaagagtatactggttggttgcccaaagttgaggaaacttgaaataagggattgt
ccatttggtaatgaagctcttctttcgggcttggagaaatatgagtcaatgagatctttg
tggatgtctgcttgcaaagtgacgctacatggttgtaagacattggctacgcaaaggcca
cggttgaatgttgaggtaatgaaggatgaggagatcgatgatggccagtcttataaggtt
tatgtttaccgtactgttgctggaccaaggacagatgctccatcttttgtccatactctt
tga
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