Eucalyptus grandis (rose gum): 104441314
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Entry
104441314 CDS
T03547
Name
(RefSeq) WD-40 repeat-containing protein MSI1
KO
K10752
histone-binding protein RBBP4
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03082
ATP-dependent chromatin remodeling
egr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104441314
03083 Polycomb repressive complex
104441314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
egr03036
]
104441314
Chromosome and associated proteins [BR:
egr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
104441314
Histone modification proteins
HAT complexes
HATB complex
104441314
HDAC complexes
Sin3A-HDAC complex
104441314
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
104441314
PRC2.2
104441314
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
104441314
Heterochromatin formation proteins
Other heterochromatin formation proteins
104441314
Chromatin remodeling factors
NuRD complex
104441314
NuRF complex
104441314
NuRF complex (fruit fly)
104441314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
EIF3I
WD40_RFWD3
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_1st
ANAPC4_WD40
WD_LRWD1
Beta-prop_HPS5
MIOS_WD40
eIF2A
NBCH_WD40
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
104441314
NCBI-ProteinID:
XP_010052712
LinkDB
All DBs
Position
4:23726160..23731596
Genome browser
AA seq
424 aa
AA seq
DB search
MGKDEEEMRGEIEERLINEEYKVWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD
YSVQKLVLGTHTSENEPNYLMLAQVQLPLEDAENDARHYDDDRADVGGFGCANGKVQIIQ
QINHDGEVNRARYMPQNSFIIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTE
GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAMQIFKVHEGVVEDVAWHLRHE
YLFGSVGDDQYLLIWDLRTPSVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKISTALHTFDAHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE
DGPPELLFIHGGHTSKISDFSWNTCEDWVVASVAEDNILQIWQMAENIYHDEDDVPGEES
NKGS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggacgaggaggagatgaggggggagatcgaggagcggctgatcaacgaggag
tacaaggtgtggaagaagaacacgccgttcctgtacgacctggtcatcacccacgccctc
gagtggccctccctcaccgtcgagtggctccccgaccgggaggagccccccgggaaggac
tactccgtccagaagctcgtcctcggcacccacacctccgagaacgagcccaactacctc
atgctcgcccaggtccagctccccctcgaggacgccgagaacgacgcccgccactacgac
gacgaccgcgccgacgtcggcggcttcggctgcgccaacggcaaggttcaaattatacag
caaataaatcatgacggagaggtgaaccgagcccgctacatgccacaaaactcctttatc
atagcaaccaagacagttagtgcagaagtttatgtttttgattacagcaagcacccatct
aagcctccactagatggtgcgtgcagtcctgacttaaggttgaggggccacagtactgaa
ggctatggattgtcgtggagtaagttcaagcaaggacacctactcagtggttcagatgat
gctcagatatgcttatgggacatcaatgcaactcctaaaaacaagtctctcgatgccatg
caaatcttcaaggttcatgaaggtgttgttgaagatgtcgcatggcatctcagacatgaa
tatttatttggttcagttggggatgatcaatacctgctaatatgggatctacggactcca
tcagtaaccaagcctgtccaatctgtagttgctcatcagagtgaggttaactgtctagca
ttcaacccctttaatgaatgggttgttgcgacgggttctacagataagactgttaagtta
tttgatctacggaagatcagcactgcacttcacacctttgacgctcacaaggaagaagtt
ttccaagttgggtggaatccgaagaatgagacaatcttagcttcatgctgccttggcaga
cgacttatggtgtgggatcttagcaggattgatgaagagcagacgccggaggatgctgaa
gatggaccgcccgagttgcttttcattcatggtggccatacgagtaaaatttcagacttt
tcatggaacacctgtgaagactgggttgtagccagcgtggctgaagacaacatccttcaa
atatggcagatggccgagaatatttaccatgatgaggatgatgttccaggagaagagtcc
aataaaggatcctga
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