KEGG   Eucalyptus grandis (rose gum): 104441642
Entry
104441642         CDS       T03547                                 
Name
(RefSeq) protein SEH1
  KO
K14299  nucleoporin SEH1
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    104441642
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:egr03019]
    104441642
   04131 Membrane trafficking [BR:egr04131]
    104441642
Messenger RNA biogenesis [BR:egr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     104441642
Membrane trafficking [BR:egr04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    104441642
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st WD40_Prp19 Beta-prop_WDR5 ANAPC4_WD40 Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd Beta-prop_Aladin Beta-prop_WDR3_2nd Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Beta-prop_HPS5 WDR55 Beta-prop_WDR35_TULP_N Beta-prop_EML Beta-prop_IFT140_1st WD40_Gbeta Beta-prop_WDR36-Utp21_2nd DSE1_N
Other DBs
NCBI-GeneID: 104441642
NCBI-ProteinID: XP_010053108
UniProt: A0ACC3L5Z6
LinkDB
Position
4:28320960..28325159
AA seq 324 aa
MEKSLLKLDKGTTCTSWNYSGDRLASGSVDGTLAVFDSRHPASSSFACTSRTKVHEGSIV
KIVWVPPEYGDAVACVCEDGTFSLWEELVEDSVPLQWKLCERFKSGSAKVLDVQFGVSPS
SLKMVVASSNGYVKVYELMNPMELKNWQLQAEFQNVIDLVSPSSKALCSSASISWNPLRG
EGQGSSFILGFSSDSPQLTSSKVWEYDQAHQRWLPVAELALPDDKGDWVYGVAWAPNIGR
PYEVIAVATEKGISIWHLSLNVEVDGRLSVEKVASLSGHEGEVWQMEWDMSGMTLATTAS
DGSVKLWQSNLKGSWQEQATFVTT
NT seq 975 nt   +upstreamnt  +downstreamnt
atggagaagtcgctgctgaagctggacaagggcacgacctgcacctcgtggaactactcc
ggcgaccggctggcctccggctccgtcgacgggacgctcgccgtcttcgactcgcgccac
ccggcttcctcctccttcgcctgcacttccagaaccaaggtgcatgaggggagtattgtg
aagatagtctgggttcctccagaatatggcgacgcggtggcttgcgtatgcgaggatgga
actttctcgttatgggaagagcttgttgaagattctgtacccctccagtggaaactttgt
gagcgctttaaaagcggttcagctaaggtgttggatgtccaattcggtgtttctccttca
agtttgaaaatggttgttgcttcctcgaatgggtatgtgaaagtctatgaactgatgaat
cccatggagctgaagaattggcaacttcaggccgaattccagaatgttatcgatctggtt
tccccatcttcgaaggccttgtgctcatcagcatcaatttcttggaatccactaagaggt
gaaggccagggatcaagctttatcttgggttttagttcagatagtccgcaacttacttcc
tccaaggtgtgggaatatgatcaggcccatcaaaggtggctcccagtagcagagttggct
ttgcctgacgacaagggtgattgggtttatggtgttgcatgggcacctaacattggaagg
ccttatgaggtgatagctgtggcaactgagaaaggaatttcaatctggcatcttagcctg
aatgttgaggtggatggaaggctctcggtggaaaaggttgcatctctttctggtcatgaa
ggcgaggtgtggcaaatggaatgggacatgagcggaatgaccttggcaacaaccgcgagt
gatggctcagtgaaactgtggcaatctaacttgaagggttcatggcaggaacaagctaca
tttgtgactacttaa

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