Eucalyptus grandis (rose gum): 104442297
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Entry
104442297 CDS
T03547
Name
(RefSeq) nuclear pore complex protein NUP62-like
KO
K14306
nuclear pore complex protein Nup62
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104442297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egr03019
]
104442297
Messenger RNA biogenesis [BR:
egr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104442297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAUS5
Mis12
Motif
Other DBs
NCBI-GeneID:
104442297
NCBI-ProteinID:
XP_039166892
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Position
4:complement(38467208..38471611)
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AA seq
784 aa
AA seq
DB search
MSDFWFGSSGATASSPSYFPAPFGVAPSSSSSSTSSVSSAPTSSFGCGLAGAVPVGTPFG
APRLAGDDDSWLLGRFKRGGSPGPSPFGSSSPSRSFGSSASSAASPFDTPAPSSGARSGW
GSFGTPQSAASSGSSLFGAATADAPPFGVASRLWSVLPFAAAAAASNPRSSPAPAPCGFA
PHFSASSASSAPSFSSGSTPAASAPTLFGTPSSAASGGSSPSGMVQPAASPSPVGPSSPS
LLFGSSGSSASSLFGTPSPSSSASSGSSVFGAATFGAPLFATSSSASSPLVGAAPTSSST
STTAVAPPLFGTPSSSAAASGASSFGGTASAASSGAPLFGTGLSLFGTTATSASASTPSA
GGSASAYSSTTLPSFAEGASSAAASLTASAVSAGSSTPASSFTEFGVTATPASSATASSV
PSFSRSTKTSTPASSQAPSATTVSAFSAPATTSAGTTASSASTTAAPTSSLGVASSNGTT
SSTSSAAARPSEIVSMATPTSTTTTPLQESNIGADDQSSVPTPEPAEESTTDLSDVEPAD
LDAVDEILGVIEPRYGESLPSSSDPSDSLTPVAFGDVRAKWEELYQLTKGGYSQIASNSA
LECRIKHLLAELSSGEDCFTKTPEFRHECEEFAKHFACGTEVYRLNCDKIESSIAAEEGF
DKLEDRLTAGKQTLKEHRSSYQAAVDRKAELTEEKERLEAVLAEVQRQIESTQLEVQREG
RSMKQQLRDVVTTMQEYDRQQTEVDRHLSIRRVCVANNKTLDEDLSDFRRSVKKLIDDPE
YIVI
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttctggttcggatcctccggcgccaccgcgtccagccctagttacttcccc
gctcccttcggcgtcgctccctcctcttcctcttcgtcgacgtcgtcggtgtcctctgct
cctacatcctccttcggatgcggcctcgcgggggccgtgccggtggggacacccttcggt
gcgccgcggttggccggcgacgatgactcgtggctattaggaaggtttaagcgcggcgga
agccccggtccgtcgccgttcgggtccagttctccttcgcgatcctttggctcgtcggcg
agctctgctgcttctccgttcgatacgcctgcgccttcttccggtgcgcgctcaggttgg
ggctcgtttgggacgcctcaatccgcggcgagttctggatcgtccttgtttggagcggcc
actgccgatgcgccgccgttcggggtggcttcgaggctctggagcgtcctccccttcgcc
gccgccgccgccgcctccaacccccgctcctcccccgctcccgctccctgcggcttcgct
ccccacttttccgcttcgtcggcgtcctctgctccttcattctcatccggctccacaccg
gcggcttcggcgccgacgctcttcggcacgccctcgtcggccgcgtccggaggatcgtcg
ccctccggaatggtccagcctgccgcgagcccgtcgccggtcgggccgagttccccttcg
ctattgttcggctcgtcggggagctccgcttcttctctgttcggtacgccttcgccttct
tccagtgcgagctcgggttcgtccgtgtttggagcggccactttcggtgcgcctcttttc
gcaacgtcttcgagcgcaagctcgccactggtcggtgcggctccaacgtcgtcatcgacg
tcgactacagccgtcgctccgcctctgtttggaacgccgtcttcctctgccgccgcctct
ggagcctcctcatttggaggaactgcttcagccgctagttctggtgcgccattgtttggg
acaggtctgtccctgttcggcacaaccgccacctccgcgagtgcatcgactccatctgca
ggtggttccgcttcggcgtactcttcgacgacattgccttcatttgccgaaggtgcctcg
tcggcggctgcgagtttgacggcgtcagcagtcagtgcaggatcttcgacgcctgctagt
tccttcacggaatttggagtgaccgcaacacctgcttcttcagcgactgctagttcggtc
ccaagcttttcgcggtctaccaaaacttcaacaccagcttcatctcaagcaccttctgcc
accaccgtctctgcttttagtgcccctgctacaacttctgcaggaacaacagcttctagt
gccagtacaactgcagctcctacatcatctcttggcgtagcttctagtaatggaacaaca
tcaagcaccagctctgcagctgctagaccttcagagattgtgtccatggccacgccgaca
tcgacaactaccacacctttgcaggaatcaaacataggcgcagatgatcaatcaagtgtg
ccaacaccagaaccagctgaagaatcaactactgatctttcagacgtcgagccagctgat
ctagatgcagtcgacgaaatcctgggagtaatagaaccaagatatggagagtccctccct
tctagttctgacccttctgactcattgacgcccgtcgctttcggtgatgttagggctaaa
tgggaggagttataccaactgacaaaaggagggtactcccagattgcttctaactcagcc
ctcgaatgcagaataaaacatctgcttgctgagttgagttctggcgaagactgcttcacc
aagactcctgaatttcggcatgagtgcgaagagtttgccaaacattttgcatgtggcact
gaagtctatagactgaactgtgacaagattgagtcgtcgatagctgctgaagaaggtttc
gacaaactggaagaccgactgactgcaggaaagcaaactctgaaagaacatcgcagttct
tatcaggctgccgtggacagaaaggctgagcttacagaggagaaagaaagactggaagcg
gttcttgctgaagttcaacgccagatagaatcgacccaacttgaagttcagcgtgaaggg
aggtctatgaagcaacagcttcgggatgtcgtcacaaccatgcaggaatatgatcgacaa
caaacggaagtcgacaggcatttatccatcagaagagtatgtgttgctaataacaagaca
ttggatgaagacctttcggatttcaggagaagtgtgaagaagttgattgatgatccggaa
tacatagtaatctag
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