Eucalyptus grandis (rose gum): 104442402
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Entry
104442402 CDS
T03547
Name
(RefSeq) protein LATE ELONGATED HYPOCOTYL isoform X1
KO
K12133
MYB-related transcription factor LHY
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
104442402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
egr03000
]
104442402
Transcription factors [BR:
egr03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
104442402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
104442402
NCBI-ProteinID:
XP_010054138
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Position
4:39030516..39037728
Genome browser
AA seq
732 aa
AA seq
DB search
MDTYSSGEDLIVKTRKPYTITKQRERWTEDEHNRFLEALKLHGRAWQRIEEHIGTKTAVQ
IRSHAQKFFSKLEKEAIVKGVPVGQTLDIKIPPPRPKRKPSNPYPRKTGASTPTLSVGAK
DGGILSVSPSNCEKLDSETASFLERASGGEKLANSKENQDDNCSEVFNLPQEAHCSSISS
TNRSVVPTPVGIQNSCTFRMFVPSLKEGVQDNGPRKVSNSENSDRSHEKSVQCRMDGYDG
PPADEMQTAHNFPRHVPVHVLDANHTKCTQAPLQDVSFQDSAFDPTGEVKARLNLFPNQT
PSAAGENQKEAPRMDHQSFPAFHPPFTPVHHNEDDYRSFLHLSSTFSSLIVSTLLQNPAA
HVAASFAASLWPYPNVENSVVDSAVCTQGTFPCRPSSSPPSMAALAAATVAAATAWWAAH
GLLPLCAPLHTGFTCNPTSATAVHSLNTSQTPGVEKERRECTFENPCSQEHLDPEHSEAL
QAQNSASKSPLGALSDSEDSGGARLDTRSKAADHEKAAVETDSQQNQSKGGKPVDRSSCG
SNTPSSSEVETDALEKQEKGNETLKDPDPNQSILEYFNRRCRSTSNVTDSWKEVSEEGRL
AFQALFSRNVLPQSFSPPRDMKNKGQQKENVEEGEQNNGEVDKDVSTLDLNRNMCISCSF
HQGPERSGVINGGEEGLLTIGLGQGKLRTHRTGFKPYKRCSVEAKETRAANVGSQSEEQG
PKRIRLEGEPSM
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggacacctactcctccggagaagacttaattgttaagacgaggaagccttatactatc
accaagcagagagaacgatggacagaggatgagcataacagattcctagaagccttgaag
ctccatggacgagcttggcagcgcatcgaagaacatattggaacaaagactgcggtgcag
atccggagtcatgcacagaaattcttttcaaagttggagaaggaggcaattgttaaagga
gttcctgtggggcagacattggatataaaaattccacctccacggcccaaaaggaaacca
agtaatccttatcctcgaaagactggtgctagtactcctacactgtcggtaggagcaaag
gatggtggaattttatctgtgtcaccatcaaattgtgagaaattggactcagagacagca
tcatttcttgagagagctagcggtggagagaagctcgcaaattccaaagagaatcaggat
gacaattgctcagaagtttttaatctgcctcaggaagctcactgttcttctatatcttca
accaacagaagtgttgttccaacaccagtgggtatccagaattcatgcaccttcaggatg
tttgttccttcgttgaaagagggagttcaggataatgggccaagaaaagtttctaattcg
gagaactctgatcgttcgcatgagaaatcagttcaatgcagaatggatggatatgatggc
ccgccagcagatgagatgcaaactgctcataatttcccgaggcatgttccagtgcatgtt
ttagatgcaaaccatacaaagtgtactcaggcccccttgcaggatgtgtcattccaggac
tctgcatttgacccaactggagaagtgaaagcacgccttaacctattcccaaatcaaact
ccatctgcagctggtgaaaatcaaaaggaagccccaagaatggatcatcaatcatttccg
gcttttcatcctccctttactccagttcaccataatgaagatgactatagatcattcctc
cacctctcatccacattttcgagtctcattgtatctacactgctacaaaaccctgctgca
catgtggcagctagctttgctgcctcactttggccgtaccctaatgtggaaaattctgta
gtagattctgccgtatgtactcagggaacttttccatgtcggccgtcgagctcccctcca
agcatggctgcactagctgctgctacagtggctgctgcaaccgcatggtgggcagcccat
ggtttgcttcctctctgtgctcctcttcacactggattcacgtgcaatcctacatctgct
acagcagttcactccctgaatactagtcaaactccaggagtggaaaaagagagaagagag
tgtacctttgaaaacccatgctcacaagagcatttggacccagaacattctgaagctctg
caagctcaaaactcagcttccaaatcacctttaggagcattgtcagactctgaggatagt
ggaggggcaaggttagatacaagatcaaaagctgctgatcatgagaaggctgcagtagag
actgattcccaacaaaaccaatcaaagggaggaaaaccagttgatcgttcctcatgtggt
tcaaatacaccttctagcagtgaagttgagacagatgcattagaaaaacaagagaagggc
aatgaaacactgaaagatcctgatccaaaccaatccattttggaatacttcaatcgtcgc
tgtagaagcaccagcaatgtgactgactcttggaaggaggtgtctgaagagggtcggctg
gcttttcaggcacttttctcaagaaatgttctgccacaaagcttttctcctcctcgtgat
atgaagaacaaagggcagcagaaggaaaatgtggaagaaggtgagcaaaataatggggag
gtagataaagatgtatcaacattagacctcaacaggaacatgtgtatctcgtgttctttt
catcaaggtcctgagaggtctggagttattaacggtggcgaggaagggcttctgacaatt
gggctgggtcaagggaagcttaggactcatcgaactggatttaagccttacaagaggtgc
tcagtagaggccaaggaaacccgggcggcaaatgttggcagccaaagtgaagagcaaggg
cccaagaggatacgcttggaaggggagccttcaatgtga
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integrated database retrieval system
