Eucalyptus grandis (rose gum): 104442924
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Entry
104442924 CDS
T03547
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104442924
Enzymes [BR:
egr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104442924
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Endotoxin_C
Motif
Other DBs
NCBI-GeneID:
104442924
NCBI-ProteinID:
XP_010054599
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Position
4:complement(17427000..17430860)
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AA seq
623 aa
AA seq
DB search
MAKKKVSLTTKGNYVMMDNGLVKLTILKPQGFLTGVKYGGMDNLLDIKSNESGRGYWDAN
WSLPGGDDRYQLIKGAEYSVIHQSNDCLEVSFKSTYNPSAPGMALPLSVDTRYIIRTGVS
GFYCYAIYERPQGCRAFDLAQTRMVFKLRQEKFHYMAITDEKQRVMPVPEDLLPGRGKQL
IVPESVLLVNPVNPDLKGEVDDKYQYSMDNKDGGLHGWISSGPIIGFWVIVPSYEFRNGG
PTKQNLTMCHSTHYIGDDILAHFGEGETWRKVFGPFFVYLNSTTKASKAHNLWSDAKKQR
KIEETSWPYDFVSSPYYLAASERGSASGRLFVQDRYISSALIPAKNAYIGLSVARTEGAW
QTESKSYQFWVQTDSSGSFSIRNVIPGVYGLHGWVPGFIGDYLEKTLITITADSETLLGN
LTFVPLRHGPTLWEIGYPDQTAIDYFVPDVNPMYVNRLFLNGPEKFRQYGLWDRYTDIHP
ESDQVFTVGFNDPKKDWFFAHVDRRGPDKYLPTTWTIKFNLNSVTGGTYKLRLAVASATR
SDLQVHINSLDQEHLVFQVMNLGTDNTVCRHGIYGLYRLFNFDISSSLLLKGDNSMYLTQ
ARGGDALCGILYDYIRLEAPATD
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaaaaaagtgagcttgaccacgaaagggaactatgtcatgatggacaatggg
ctggtgaaactcaccattttgaagcctcagggtttcttaaccggggtaaagtatggaggg
atggacaacctcttggacatcaagtcgaatgaatccggcagaggatattgggatgccaat
tggagtttgccagggggcgacgacagataccaattgatcaaaggggcagagtatagtgtt
attcatcaaagcaatgactgcctggaggtctccttcaagagcacttataatccgtctgct
ccaggcatggcgctgcctctaagtgtcgacacaaggtacattatcagaactggtgtttca
ggcttttactgctacgcaatatacgagcgcccgcaaggatgccgtgcctttgaccttgca
cagacgaggatggtgtttaaattgcgacaagaaaagtttcactacatggcaattacagat
gaaaagcaaagagtaatgcctgtgccagaggacctacttcctggcagaggcaaacagttg
attgtgcctgaatctgttttgctagtaaaccctgttaatccagacctcaaaggcgaagtg
gatgacaaatatcagtactcgatggacaataaggatggtggacttcatggatggataagt
tcaggtcctatcatcgggttttgggtcattgtcccaagttatgagttccgcaatggtggc
ccgacaaagcaaaatctcacaatgtgtcattcaacccattatataggagatgatatccta
gctcattttggagagggagagacatggagaaaggtctttggcccattcttcgtgtacctg
aattcgactactaaagcatcaaaggcacacaacttatggtcagatgcaaaaaagcagaga
aagattgaggaaacatcatggccatatgattttgtttcatcaccctactatctagccgct
agcgagcgtggttcagcttcgggaagactctttgtccaggacaggtatatatccagtgct
ttaattcctgctaaaaatgcatatattggtctatcagtggcaaggactgagggagcctgg
caaactgagagcaaatcttatcagttttgggttcaaacagactccagcggaagtttctcc
ataaggaacgtaattcctggagtctatggacttcacggatgggttcctggtttcattggt
gactacctagagaaaacactgattactattaccgcagattcagagacactgcttgggaat
ttgacctttgttccgcttagacatggtccaaccttgtgggagatcgggtatcctgatcaa
acagcgattgactactttgtccctgatgttaatccgatgtatgtcaaccggttatttctg
aatggtcctgaaaagttcagacagtacggcttgtgggacaggtataccgacatacaccct
gaatctgatcaagttttcacagtagggttcaatgatccaaagaaagactggttttttgcc
catgttgacaggagaggaccagataagtatcttcccacaacatggactattaagttcaat
ctgaattcagtgacaggaggaacctacaagctcaggctagccgtcgcatcagctactcgc
tccgatcttcaggttcatataaattctctggatcaagaacatttggtgttccaagtgatg
aatttgggaacagataacacagtttgcagacatggtatttatggattataccggcttttc
aactttgacatttcttcatcattgttgctaaagggagacaattccatgtatctcacacaa
gccagaggaggcgatgcgctttgcggaattctctatgactatatacgccttgaagcgcca
gccactgattag
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