Eucalyptus grandis (rose gum): 104443498
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Entry
104443498 CDS
T03547
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1A
KO
K15559
regulator of Ty1 transposition protein 103
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egr03021
]
104443498
Transcription machinery [BR:
egr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104443498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
Pol_alpha_B_N
IZUMO
Motif
Other DBs
NCBI-GeneID:
104443498
NCBI-ProteinID:
XP_010055253
UniProt:
A0A059DHV2
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Position
1:complement(41387796..41398627)
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AA seq
566 aa
AA seq
DB search
MSSEDFDVQALGEKLLKLNNSQQSIESLSQWCVSHRKKAKQIVETWDKTFNSSQKEKCVS
FLYLANDILQNSRRKGSEFVNEFWKVLPAALKHVYGNGDELGKKVVTRLVDIWDERKVFG
SRGHGLKDEMLGKDPPPVSVSNGKSSNPIKIVKRDASSVRVKLAVGGLPEKILTAYQSVL
DEHSTEEAALDKYSAAATQVEKIEEDADSKLNQGSQQGSALVDDLQEQEDIIKQCISQLE
NSEATRATLISQLRDALHEQESKLGHVRAQLQGARVQVEQASNLRKRLIAPSVLLPQGPT
NSFLERPRMEQSLPSIQPMSNTTQPPLSQPAMPFSSLKTSDEDSKKAAVAAIAAKLSNST
SSAQMLSSVLSSLVAEEAASKNGGLKPASFSSALPIFPPEKRPKLEKMPVSNSGNSDLGN
LSYFSPLQQQSGSNMPVATSMGMPPASQSNQMQAPFASPPPPPPLPSSLSSANLSGSQYV
QSAGMNMMAGLIPYGFGASLPPPPPLPPPHISLQPLARPGLQPPQQPHVEQPQQHQQPAS
GGYYQPPGLGFFGQSHQSATPPVPRQ
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtgaggatttcgacgtgcaggcgttgggcgagaagctgttgaagctcaacaac
tcgcaacagagcatcgaatcattgtcccagtggtgtgtttctcacaggaagaaggccaaa
caaattgttgaaacgtgggataaaacttttaattcttctcagaaggagaagtgtgtttct
tttctttatttggccaacgacattctgcaaaatagtcggagaaagggtagtgaatttgtg
aatgagttttggaaagttctgcctgcagcgcttaagcatgtctatggaaatggagatgaa
cttggaaagaaagtggtgaccagactggttgatatatgggatgaaaggaaagtttttggt
tcgcgggggcatggccttaaagatgagatgctaggaaaagatcctcctcctgtgtctgtg
agcaatggaaagagttcgaatcccattaaaattgtgaagagggatgctagctcagtaaga
gtgaaattagctgttggaggtctgccggaaaaaatcctaactgcctatcaatcagtactc
gacgagcattctactgaagaggctgctttagacaaatacagtgctgcggcaacccaggtg
gaaaaaattgaggaagatgctgatagtaaattgaatcaaggaagtcagcaaggttctgca
ttggtagatgatctacaagagcaagaagatatcattaagcagtgcataagtcaacttgaa
aattctgaagcaacaagagctaccttgatttcccagcttagagatgcgcttcatgagcaa
gagtcaaagttgggacatgtgcgtgcacaattgcaaggtgctcgagttcaggttgaacag
gcaagtaatttgcggaaaaggctcatagcaccctctgttcttttaccccaaggccctact
aactcattcctagaaaggccaaggatggagcaaagcctgccttcgattcaaccgatgagc
aacacgactcagcctcctctctcccaacctgcgatgcctttttcctccctcaaaacttca
gatgaagacagcaagaaagctgcagttgctgcaattgctgctaagctttctaactctaca
tcttctgcccaaatgcttagctcagtactttcttccctcgttgcagaagaggctgcctca
aagaatggtggcttgaagcccgcttcattttcctcggctttgcctatctttcccccagag
aaaaggcccaaacttgagaaaatgcctgtctccaattctggcaactccgatttgggaaac
ttgtcctactttagccctttacagcagcaatcggggagcaacatgccagtcgcaacgtca
atgggcatgccacctgcgtcacaatcaaatcaaatgcaagcaccatttgcttcaccacct
cccccaccgccactgccttccagtctatcttctgcaaacctgtctgggagtcaatatgtc
caatctgctggtatgaatatgatggcgggcctgattccttatggatttggagcgagccta
ccaccaccgcctcccctgccaccaccacatattagtctgcagcccttggcaagacctggc
cttcagccacctcagcagccacatgtggagcaaccgcagcagcaccagcaacctgcttct
gggggatattatcagccaccaggccttggcttcttcggacaaagtcatcaatcagcaaca
ccgccagtaccgaggcagtga
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