Eucalyptus grandis (rose gum): 104443828
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Entry
104443828 CDS
T03547
Name
(RefSeq) serine/arginine-rich splicing factor SR45a isoform X1
KO
K12897
transformer-2 protein
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104443828
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
egr01009
]
104443828
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egr03041
]
104443828
Protein phosphatases and associated proteins [BR:
egr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104443828
Spliceosome [BR:
egr03041
]
Common components
Common spliceosomal components
SR proteins
104443828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
104443828
NCBI-ProteinID:
XP_010055674
UniProt:
A0A059C131
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Position
5:complement(8287140..8290819)
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AA seq
249 aa
AA seq
DB search
MPYKRRQKSPSPRESASPIRGRRSKSRSLSRSRDSASPVRGRRSKSRSLSRSRDSASPIR
GRRLRSRSLSRSRRSRSRSQEYQAVGNPGNNLYVTGLSTRVTSRDLEKYFSKEGKVLECQ
LVTDPRTKDSRGFGFVTMETNKDAERCIKYLNQSVFEGRLITVEKARRKCGRTPTPGRYL
GLKEKRGRGGRRSRSYSPRRRRDDDYYPRDRRGRSRSPRGRREREKERPDSSRRRRERSL
SRDSGGYSR
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgccatacaaaaggagacaaaagtctccttctcctcgtgaatctgcctcacccattaga
ggccgtcggtccaagtcaagatcgttgtcgagatcaagggattctgcttcacccgttaga
ggccgtcggtccaagtcgagatcgttgtcgagatcaagggattccgcttcacccattaga
ggccgtcggttgaggtcaagatcgttgtcaagatcgaggagaagccgctcaaggagccaa
gagtaccaagctgttggcaatccaggaaataacttgtatgtgacgggtttatcaaccagg
gttacttcaagagatctcgaaaaatattttagtaaagaaggaaaggttttggagtgccag
ttggttactgaccctcgcaccaaagactcgcgcggatttggttttgtcaccatggaaacc
aacaaggatgcagagcgctgtataaagtatctgaaccagtcagtgtttgaaggccgactg
atcactgtggagaaggcaagaaggaagtgtgggaggactccaactcctggaaggtatctt
ggattgaaagaaaaacgaggccgtggtggtagaagatcccgcagctattctccgcgccga
cggcgcgacgatgattactatccaagggaccggcgaggaaggtcccgatcacctcgtggc
aggagggagagggagaaggaacgtccggactcgtccaggagacgcagggagcgctcctta
tcgagagacagcggtgggtattctagatga
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