Eucalyptus grandis (rose gum): 104443863
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Entry
104443863 CDS
T03547
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase ATL6
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
egr04121
]
104443863
Enzymes [BR:
egr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104443863
Ubiquitin system [BR:
egr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
104443863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
Prok-RING_1
zf-Nse
zinc_ribbon_16
DUF1272
Arc
Prok-RING_4
Baculo_RING
RINGv
PHD_NSD
PHD
zf_RING_Vps8_fungal
Zn_ribbon_IFT122_C
RH_dom
zf-RING-like
APC_r
Motif
Other DBs
NCBI-GeneID:
104443863
NCBI-ProteinID:
XP_010055725
LinkDB
All DBs
Position
2:complement(31385794..31387573)
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AA seq
411 aa
AA seq
DB search
MSSSGNLSSSRSSLVLVLLLWSCASSTPFAAAQANPPPDSENPYNYTRFSPSMAVIIVVL
IAALFFMAFFSIYIRHCSDANSASIRPGGGVVGTGRSRRGGASRGLDPAVIATFPTLVYA
DVKGLKIGKGALECAVCLNEFQDDETLRLIPKCDHVFHPECVDAWLASHTTCPVCRANLV
PQPGEGPFELPELTRRSELAGEDEENQNRDGDLERAIATLEREDADEVEVEVAVDRQAAE
PPPEAADPSKTLNRNRTRGGSRSSRMAWRLLFPRSHSTGHSLVQPGEDTERFKLRLPAEV
RKQIMNRQLNRAMSMVVLPRESSSRRGYRAGAGEGSSRFGRHFSFRRLDRSEPGAKSDRW
FFXEGPPLFSRASSLRSPRVAAASDDGGSVGSRRSRMEAAESSGAPLRPPV
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgagctcctccgggaatctgtcctcctcgcggtcgtcgctcgtgctcgtgctgctgctg
tggtcgtgcgcttcttccacgccgttcgccgccgcgcaggccaaccctccgcccgacagc
gagaacccgtacaactacacgcgcttcagcccctccatggcggtgatcatcgtcgtcctc
attgccgccctcttcttcatggccttcttctccatctacatccgccactgctccgacgcc
aactccgccagcatccgccccggaggcggggtggtcgggactggccggtcgcggcgcggc
ggcgcctcccgcggcctcgacccggccgtcatcgcgacgttcccgacgctcgtctacgcc
gacgtgaagggcctcaagatcgggaagggcgcgctggagtgcgcggtgtgcctgaacgag
ttccaggacgacgagacgctccggctgatccccaagtgcgaccacgtgttccacccggag
tgcgtcgacgcgtggctggcctctcacacgacctgcccggtgtgccgcgcgaatttggtg
ccgcagcccggcgagggtccgttcgagctacctgagttgactcgccggtcggagctcgcc
ggagaagacgaagagaatcagaatcgggacggggatctggagcgagcgatcgcaacgttg
gagcgcgaagacgccgacgaagtcgaagtcgaagtcgcggttgaccgtcaagcggccgag
ccgccacccgaagcggcggatccgagcaagacgctgaaccggaaccgtacgcgcggcggg
tcgcgatccagcaggatggcgtggaggctcctattcccgcggtctcactcgaccgggcac
tcgctggtccaaccgggggaagacacggagcggttcaagctgaggttgccggccgaggtg
aggaagcagatcatgaaccggcagctgaaccgggcgatgagcatggtggtgttgccacgg
gaaagcagctcgcggcggggctatcgggccggagctggagaagggagcagtaggttcggc
aggcacttcagcttccggcggttggaccggtccgagcctggagctaagtcggaccggtgg
ttcttcngggagggtccgccgctgttctcgagagcatcgtcattgaggtcgccaagggtg
gcagcagccagtgacgacggaggaagcgtgggttctcggcggagcaggatggaggccgct
gaatcgagcggtgcgccacttcgcccgccggtttaa
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