Eucalyptus grandis (rose gum): 104444151
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Entry
104444151 CDS
T03547
Name
(RefSeq) nuclear pore complex protein NUP98A-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104444151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egr03019
]
104444151
03036 Chromosome and associated proteins [BR:
egr03036
]
104444151
Messenger RNA biogenesis [BR:
egr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104444151
Chromosome and associated proteins [BR:
egr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104444151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
104444151
NCBI-ProteinID:
XP_039167989
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Position
5:10715809..10719850
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AA seq
577 aa
AA seq
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MSGPTYPFGNPTGRASRRGSASGRANNANNSSFMFGGTSRGVSEGVSVFSFGPLPGASSA
SAFGGFAYGARAAAPIFGSEGAFGASGNPAFGGFCSPPFGFISSTASKPAETTFSSNQFG
AHIGSQVATPLLGSADFGKSSFRGRWLSGSRVAPFTPATEADTGVALPSGELQSICCTTL
HPYREKSHEELRWEDYQLGDKGGPNHAGQSGVGQATALCGQSATPAFGQMRTFNTASSGY
GGSLFPNTASPFFSTNAAATRQTNPSFPSPFQTAGVAETSGKLTGSAFGSQSIFGLRNTA
NDNPFVANSSGCSLFGGNPFSSPTGGSVSFGGTSTGVFRSGLTQTPPLFSSEATQTPSLF
SSKAAFRAADGIPKDGPLEEQTDFVEVCQKIKGVHLDSSLQNDEEHVINKGTGESAVEHD
CDAGIEALMPKLSQPDYYTKPDVKELAAKERAEPGFCCRVKDFVIGRLGYGHIKFAGETD
VRRLDLESLIRFNNSEVIVYTDERKKPPIGQGLNKPAEVTLLNVKCIDKKTGKQYIEGPI
VEKYKEMLKKSAEEQGTEFVSYDPIKGEWKFKVRHFN
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtccgacctaccctttcgggaatccgactggccgtgcctcccggcgaggatca
gcatccgggcgtgctaataatgcaaataacagttcctttatgtttgggggaacttcaaga
ggagtctccgaaggtgtttcggtcttctcctttggacctctccctggtgcttcttcagcg
tcagcttttggtggatttgcatatggtgcaagggcagctgctcccatctttgggtctgaa
ggcgcatttggggcttccggtaatccagcttttgggggtttttgtagcccaccatttggc
tttatatcttctacagcttctaagccagcagaaaccacatttagcagcaatcagtttgga
gctcatatcgggtctcaggtagctacaccattattaggcagtgctgattttggaaagtcc
tcttttagaggtcggtggcttagcggaagtcgtgtagctcccttcactccggcgactgag
gcagacactggagtggcattgccatctggcgagctccagtcaatttgctgtacgactctc
cacccctacagagaaaaaagccacgaggaacttagatgggaggactaccagttgggggac
aaaggtggaccaaatcacgccggtcagtctggtgttggccaagctactgctctctgtggc
caatctgccacccccgcttttggtcaaatgcgcacatttaatacagcttccagtggctat
ggtggaagcttattcccaaatactgcatcgccctttttttctactaatgcagccgcaacc
aggcagacaaatccctcttttccttcgccttttcaaacagctggagttgctgagacttct
gggaagctgactggtagcgcctttgggtcacaatcaatattcgggctgcgtaacactgca
aatgacaatccttttgtggccaattcttctggttgttctctttttggcggtaaccctttt
agctcaccaacaggtggctctgtatcatttgggggaacttcaaccggagttttcaggagt
ggtttaactcaaactcctccgctcttctcttcagaagctactcaaactccttcactcttc
tcttccaaagctgccttccgtgctgcagatggcattcccaaagatggtcctttggaggag
caaactgattttgtcgaggtctgccagaaaattaagggagttcatcttgattcgtctctt
cagaatgatgaggaacatgtgattaataaaggaactggtgagtctgcagttgagcatgat
tgtgatgctggcatcgaggcacttatgccgaagctctctcagcctgactactataccaaa
ccggatgtcaaagaattagcagccaaggaaagagctgaaccaggattttgctgtcgagtc
aaagattttgtcattggacgacttggttatggtcacattaaatttgcaggggagactgat
gtaagaaggcttgatctcgagtccctcattcgcttcaacaatagtgaagtgattgtatac
acagacgagaggaagaaaccgcctatagggcaagggctcaacaagccagctgaggtgact
cttcttaacgtaaaatgcattgataagaagactggaaagcagtacatcgaggggcctata
gttgagaagtacaaggagatgctcaagaagagcgctgaggaacaaggcactgagtttgtg
tcctatgaccccatcaaaggagagtggaagttcaaggttcgccatttcaattga
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