Eucalyptus grandis (rose gum): 104444488
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Entry
104444488 CDS
T03547
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
egr04121
]
104444488
Enzymes [BR:
egr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104444488
Ubiquitin system [BR:
egr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
104444488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-ANAPC11
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
104444488
NCBI-ProteinID:
XP_010056461
LinkDB
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Position
3:complement(52933641..52935274)
Genome browser
AA seq
354 aa
AA seq
DB search
MYDAPPFFPSAETRLPPSSSSSSSSSPSLSNLSPSIIITLMVLSVAIIVTTCLCLLFRHL
HRLPLPRCLLHRHLSTSSSSSSSSPPLRASAPPPQDGAAVVHDESFIDSLPLFSFSSVTR
RSSSAADGDCAVCLCKFKPHDLLRLLPLCCHAFHAECIDTWLQANRTCPLCRSNVHACEA
DLEALLQSSARIHAGGDVGGGGGGRRSFRLEIGSVSRRRSSVDGGEAEARRSYSIGSFDY
VVDADSEVAVAGDRHRRSVSDKDDGAAHLAAAIAMDASLAADVASGRSWLGDYMDRLSAT
LSSRTASFRSSRRFFSGSSRRSDASAAGFVSDWDLEASRVGEEISELFRWASGV
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcgccgccgttcttccccagcgcggagacgcgcttgccgccgtcctcgtcg
tcgtcgtcgtcttcctcgccgtcgctgtccaacctcagtcccagcatcatcatcaccctc
atggtgctctccgtcgccatcatcgtcaccacctgcctctgcctcctcttccgccacctc
caccgcctccccctccctcgctgcctcctccaccgccacctctccacctcctcctcctcc
tcctcctcctcgcctcctctccgcgcctccgcgcctcctcctcaggacggcgccgccgtc
gtccatgatgagtcgttcatcgactcgcttcctctcttctccttctcgtccgtcacccgc
cgctcctcatcggcggccgacggggactgcgccgtctgcctctgcaagttcaagccccac
gacctgctccggctgctccccctgtgctgccacgccttccacgccgagtgcatcgacacg
tggctccaggcgaaccggacgtgcccgctctgccgatctaacgtccacgcctgcgaggcc
gacctcgaggccctgctccaatcgtcggcgaggatccacgcgggcggcgacgtcggcgga
ggaggaggagggaggaggagcttcaggctcgagatcggctccgtgagccggcgccggtcc
tccgtcgacggaggcgaagccgaggcgcggcggtcctactccatcggctccttcgactac
gtcgtggacgcggactcggaggtcgcggtcgccggggatcggcaccggaggagcgtctcg
gacaaggacgacggcgcggctcatctggcggcggcgatcgcgatggacgcgagcctcgcc
gcggacgtcgcctcggggaggagctggctcggggattacatggatcggctctcggccacg
ctctcgtcgcggaccgcgtccttccggagctcgaggaggttcttctcgggcagcagccgc
cggagcgacgcctccgccgccggcttcgtcagcgactgggacctggaggccagccgcgtc
ggagaagaaatcagcgagctcttccggtgggcctcaggggtataa
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integrated database retrieval system
