Eucalyptus grandis (rose gum): 104444719
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Entry
104444719 CDS
T03547
Name
(RefSeq) chromatin-remodeling ATPase INO80 isoform X1
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104444719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
egr03036
]
104444719
Chromosome and associated proteins [BR:
egr03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
104444719
INO80 complex (yeast)
104444719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
104444719
NCBI-ProteinID:
XP_010056757
LinkDB
All DBs
Position
1:44177600..44191036
Genome browser
AA seq
1526 aa
AA seq
DB search
MDPRRHSKDSLSYSSLFNLEPLMSYKLPQRDDDFDYYGSSSQDESRGSQGAALRPSNGTM
SNKKKKRSFNSDNEDGDGYYGAKITEDRYRAMLGEHIQKYRRRPKDHSSFAQLATVGIPL
PRGNNSGPKTHKLANERRGGLYDVEAEPEWANGINLHKDRNNQNTDVAPVNSLERVVYEP
SFLDIADGITYKIPPTYDTLAASLNLPSFSDVTVEEFHLKGSLDLGSLAKLMASEKRLGP
RNRAGMGELRPQYESLHARLKASNAAQQFSLKVSDVGLSSIPEGAAGNIKRSILSEGGVL
QVYYVKVLEKGDAYEIIERSLPKKAKVIKDPSLIEKEEMEKIGKVWVNIVRRDIPKHHRI
FTAFHRKQLNEAKRFSENCQREVKMKVSRSLKLMRGAAIRTRKLARDMLLFWKRVDKEMA
EVRKREEREAAEALKREQELREAKRQQQRLNFLIQQTELYSHFMQNKPNSQQPEAFPVGD
TKVNDQETLLSSLDMEPGQDEDPEEAELRKEALKAAQDAVSKQKRLTDAFDTECLRLRHP
SETEVTMPDTLVTGSSNIDLQTPSTMPAMSTVRTPELFRGSLKEYQLKGLQWLVNCYEQG
LNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTL
PYWGGLQERTVLRKNINPKRLYRRDAGFHILITSYQLLVSDEKYFRRVKWQYMVLDEAQA
IKSSSSIRWRTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKG
IENHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVIQELTRKTEITVHCKLSKRQQAFYQ
AIKNKISLTELFDGSRGHLNEKKILNLMNIVIQLRKVCNHPELFERNEGSTYFHFGEIPN
ALLPPPFGELEDVHYSGGQNPITYQMPKLVNEESLQHPGMLDASVRHGLCRESYQKLFNI
FSPSNVHQSTFSEENSSKGPFVKSGTFGFTHLMDLSPAEVAFVATGTCMEKLLFSMGEWN
GQLLDQMVDFVIETTDDDMRCNHLDRGKVKAVTRMLLMPSRSEASLLTRKYATGPSDAPF
EALVYSDQDRFLSNIRLLHSTHAFIPRARAPPIGVHCSNRNFTYKTIEELHHPRMKRLFL
GFARTSEYNGPRKPHCPPHPLIEEIDAELPISQPALQLTYRIFGSCPPMQSFDPSKLLTD
SGKLQTLDVLLKRLRAENHRILLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDM
VRDFQHRNDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDV
TVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDLLAPEDVVSLLLDDAQLEQKLR
EIPPQVKDRQRKKQSTKGIRLDAEGDASLEDLTNIAAEGAGNEPTPDADKTKSSSKKRKA
TADKQSSLKSRNPPRMSEHSSSPTEYPFDDSLPYNDQQSQKPKRLKRPKKSVNENLEPAF
TPAPNIPPEQNQFQPIHEFGSSDPST
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
atggaccccaggcggcactccaaggactcgctctcctattccagcctcttcaacctcgag
ccgctgatgagctacaagctgccgcagcgggacgatgattttgactactacgggagcagt
agccaggacgagagcagaggtagccaaggagcagcgttgcgaccgagtaatggtacgatg
tctaataagaagaagaagcggtcttttaatagcgataatgaagatggggatgggtattac
ggagcgaagattacggaggatcgttaccgagctatgctgggggagcacattcagaagtac
aggaggagaccgaaggatcattcgtcgttcgctcaactagcaacggtgggcattccactc
ccaaggggtaataattctgggccaaaaactcacaaactggcgaatgagcggcgtggaggc
ttgtatgacgtggaagctgaacctgaatgggccaacggcatcaatcttcataaggatagg
aacaaccagaataccgatgtagcacccgttaacagtttggaaagggtggtatatgaacct
tcgtttttggacattgctgatggcataacatataagattcccccaacttatgatacattg
gcggcttcactgaatttaccaagtttctcagatgtcacggtagaggaatttcacttgaaa
ggtagcttggatttgggttccttggcaaaactgatggccagtgagaaaaggctcgggcct
agaaatagagctggaatgggagagcttagaccccaatatgagtcacttcatgctagattg
aaggcatctaatgctgctcaacagttcagtcttaaggtatcagatgttgggttgtcctca
attcctgaaggagcagctgggaacataaagaggtctattttgtccgagggtggtgttttg
caggtttattatgtgaaggttttggaaaaaggagatgcatatgagatcatcgaacgaagt
ctacccaaaaaggcaaaagtgatcaaagatccttctttgattgagaaggaagaaatggaa
aagattggaaaagtttgggtgaacattgtcaggagagacataccaaaacatcatcggatt
ttcacggcctttcataggaagcaactaaatgaagccaagaggttctcagaaaactgtcag
agagaggtcaaaatgaaggtgagtagatcacttaagttgatgaggggtgctgccattcgt
acaaggaaattggctagagacatgttgctgttctggaagcgagtagataaggagatggca
gaagttaggaaaagggaagagagagaagctgctgaagccttgaagcgtgagcaggagctt
cgagaagcaaagagacagcaacaaagacttaatttccttatacagcagaccgaactgtac
agtcacttcatgcagaataagccgaattcacagcagcctgaagcttttcctgtgggcgac
acaaaggtaaatgatcaagagacactactcagttctttggatatggagcctggtcaggat
gaagatcctgaagaagctgaattgagaaaggaggctctgaaagctgctcaagatgctgtc
tctaaacagaaaagactaactgatgcatttgacactgaatgcttgagattgcgccacccc
tctgagactgaggtgactatgccagataccttagtaacaggatcgagtaatatagatcta
cagacaccctctaccatgcctgctatgtcaactgttcggaccccagagttatttagaggc
agccttaaagaatatcagttaaagggccttcagtggctagtcaattgttatgagcagggt
cttaatggcatacttgctgatgagatgggtcttgggaagactattcaagcgatggcattc
ttggctcatcttgctgaggagaagaatatatggggtccatttcttgttgttgcacctgcc
tctgttttgaataattgggcagatgaaattagccgtttctgtcctgatttgaaaactcta
ccttattggggtgggcttcaagaacggacggtactcaggaaaaatatcaacccaaagcgc
ctttatcggagggatgctggatttcacattctcatcaccagctaccaactgctagtctct
gatgaaaagtattttcggcgtgtgaagtggcaatatatggtattggatgaggcacaggca
ataaaaagttccagcagtataaggtggaggacacttctcagttttaattgtcggaatcgc
ttgcttcttactggcactccaatccagaacaatatggctgagttgtgggctcttctgcat
tttatcatgcctaccttgtttgacagtcatgaacaatttaatgagtggttctctaaagga
attgagaaccatgcagagcacggtggaactcttaatgaacaccagctcaacagattgcat
gcaattttaaagccattcatgttgaggagagttaaaaaggatgtcatccaagagctgacg
agaaaaacagagattactgtacattgcaagttgagtaagcggcaacaagctttttaccaa
gctattaagaacaagatatctctcactgaattgttcgacggaagtcgtggacatctcaat
gagaagaaaatcttgaatttgatgaatattgtcatccagctgagaaaggtctgcaaccat
ccagaattgtttgaaaggaatgaaggaagcacttatttccattttggagaaattccgaat
gctcttttgcctcctccttttggtgaattggaggatgtacactactcaggaggccaaaat
ccaataacataccagatgccaaaactggtaaatgaggaaagtctacaacacccaggaatg
cttgatgcatctgttaggcatggtttatgcagagagtcctaccaaaaactttttaatata
ttctccccctctaatgtgcatcaatctacattttcagaggaaaatagctcaaaggggcca
tttgttaaaagtggcacttttggttttactcatttaatggatctgtccccggctgaggtt
gcatttgtcgctactggtacttgtatggaaaaactgttgttttccatgggagaatggaat
ggtcagctattggatcaaatggtggactttgtaattgaaaccactgatgatgacatgaga
tgcaatcaccttgacagaggaaaagtgaaagctgttacaagaatgctgctaatgccatca
agatctgaagcaagcttgcttacaaggaaatatgctactggtccttctgacgctccattt
gaggctttagtttactctgatcaggataggtttctatccaacattaggctactgcattca
acacacgcatttattccccgagctagagctcctccgattggtgtccattgttcgaataga
aacttcacatacaaaacaattgaagaattacatcatcctaggatgaagagattgttcttg
ggatttgcccgcacatcagagtacaatggaccaagaaagccacattgcccacctcatcct
ttaattgaagagattgatgctgagctacctatctcacagccagctcttcagcttacatac
agaatatttggttcttgtcctcccatgcagagctttgacccctcgaagttgcttaccgat
tctggtaagctccaaacattggatgtattgctgaagcgcttgcgtgcagaaaatcatcgc
atccttctgtttgctcagatgacaaagatgctcaatattcttgaggactatatgaattac
agaaaatataggtacctaaggttggatggatcctccaccattatggatcgacgagatatg
gtcagagactttcaacatcggaatgatatttttgtattcctactgagtaccagagctggt
ggactgggaattaacttaacagcagctgacacggtcatattttatgaaagtgattggaat
ccaacactggatttgcaggcgatggatcgcgctcacagattgggtcaaacaaaggatgtt
actgtttatcggttaatctgtaaagagacagttgaggagaaaattcttcaaagagctagt
cagaaaaatactgttcagcagcttgtcatgacagggggtcatgtccagggcgatctgttg
gctcctgaggatgttgtctcgttacttttggatgatgctcaattggagcaaaaactaaga
gagatcccaccacaggttaaggatagacaaagaaagaagcagtcaacgaagggcatccgc
ttagatgctgaaggggatgcgtctttggaagacttaacaaacattgctgctgagggtgct
ggaaatgagcccactcctgacgcagacaaaacaaagtccagtagcaaaaagaggaaagcc
actgctgacaagcaaagctcgttgaagtcaagaaacccgcctaggatgagcgaacatagc
tcatcacccacagagtatccttttgacgacagcttaccatataatgaccagcaatcacag
aaaccgaagagactaaagaggcctaagaagagcgtgaatgagaatctcgagcctgcattt
actcctgcacccaacatacctccagagcagaaccaatttcagcctattcatgaatttggt
tccagtgatcccagtacttga
DBGET
integrated database retrieval system
