Eucalyptus grandis (rose gum): 104444840
Help
Entry
104444840 CDS
T03547
Name
(RefSeq) cullin-4
KO
K10609
cullin 4
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03420
Nucleotide excision repair
egr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104444840
09124 Replication and repair
03420 Nucleotide excision repair
104444840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
egr04121
]
104444840
03400 DNA repair and recombination proteins [BR:
egr03400
]
104444840
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
egr04147
]
104444840
Ubiquitin system [BR:
egr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
104444840
DNA repair and recombination proteins [BR:
egr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
104444840
TCR (transcription coupled repair) factors
Cul4-CSA complex
104444840
Exosome [BR:
egr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104444840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Tuberculin
Motif
Other DBs
NCBI-GeneID:
104444840
NCBI-ProteinID:
XP_010056896
LinkDB
All DBs
Position
5:32117708..32131937
Genome browser
AA seq
838 aa
AA seq
DB search
MSHPTKRFATSASTTGPSSSSSSSGDGAAPSPFAAPPMKKAKSQAVAGSLDSTTAHKNGL
HPHPAKQQSQQPGFDPESDVVFDPATMSLEDGMKSDDMVAGHSVAANLSRKKATPPQPAK
KLVIKLLKAKPTLPTNFEEDTWAKLKAAINAIFLKQPVSCSLEDYYQAVNDLCLHKLGGN
LYQRIEKECETHISAVLQTLVGQSPDLAVFLSLVERCWQDFCDQMLMIRGIALYLDRTYV
KQNPNVRSLWDMGLQLFRKHLHLSVEVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMF
TALGIYAESFEKPFLECTSEFYAAEGMKYMQQSDVPDYMKHVEVRLHEEHERCLLYLDAS
TRKPLIATAERQLLERHIPAILDKGFMMLMDGNRIEDLQRMYQLFARVNALESLRQALSL
YIRQTGQGIVMDEEKDKDMVPSLLEFKASLDAIWEDSFSKNEMFCNTVKDSFEHLINLRQ
NRPAELIAKFLDEKLRAGNKGTSEEELESILDKVLVLFRFIQGKDVFEAFYKKDLAKRLL
LGKSASIDAEKSMITKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGI
EMSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQSSLGHCVLKAD
FPKGRKELAVSLFQTVVLMLFNDAQKLSFQDIRDSTGIEDKELRRTLQSLACGKVRVLQK
VPKGRDVEDDDSFEFNEAFSAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIV
RIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaccccaccaaacgctttgccaccagcgcttccaccaccggcccctcctcctcc
tcttcctcctccggcgacggcgccgccccttctcccttcgctgctccacccatgaagaaa
gccaagtcccaggccgttgccggttccctcgactccactaccgcccacaagaatggcctc
cacccacatcctgccaagcagcagtcgcagcagccaggattcgatcccgagagcgatgtc
gtctttgatcctgcgaccatgtctcttgaagacggcatgaagtcggacgacatggtggca
gggcacagcgtcgccgccaatttgtctcgaaagaaggctacgcctccgcagcctgccaag
aagctcgttatcaagcttttaaaagccaagccgacacttcccacaaattttgaagaggat
acatgggcaaagctcaaagcagctataaatgcaatattcttaaagcaacctgtttcctgt
agtttggaggattattatcaggctgtcaacgacctctgcctacacaaattggggggaaat
ctttatcaacgaattgagaaagagtgtgaaacacatatttcagcggtgctgcagactctc
gtcggccagagcccagatttggcagtttttttatcacttgttgagagatgctggcaggat
ttctgtgaccagatgctgatgattcgcggcatagccttatatttggatagaacctacgtg
aagcaaaacccaaatgttcggtcgttatgggacatggggttgcaacttttccgaaagcat
cttcatttgtcagtggaagttgagcataaaactgtcaccggtctcttaagaatgattgaa
agggaaaggttgggtgaagcagttgatcggacacttcttaatcatcttctgaagatgttt
acagctctaggaatttatgcagaaagttttgagaagccattccttgagtgcacatccgaa
ttttatgcggctgaaggcatgaagtacatgcagcagtcagatgttccagactacatgaaa
catgtggaggttaggttgcatgaagaacatgagaggtgcttgctctaccttgatgctagt
acaaggaagcctctaattgctactgcagaaaggcaacttctagaacgacatatacctgct
attcttgataagggattcatgatgctgatggatggaaatcgtattgaggaccttcagaga
atgtaccaattgtttgcaagggtaaacgccttggagtcattaagacaagcacttagcttg
tacatacggcaaactggtcagggtattgtcatggatgaagaaaaagataaggacatggtg
ccgtctcttttggagtttaaggcttctctagatgcaatatgggaggacagtttttcgaag
aatgaaatgttttgcaacactgtcaaggattcatttgagcatctaatcaatcttcgtcag
aaccgaccagctgagttaattgcgaagtttcttgatgaaaagttgcgtgctggtaataaa
ggaacctcagaagaggaattggagagtatacttgataaagttctggttttgtttaggttc
atccagggaaaagatgtgtttgaagcattctacaagaaggatcttgcaaagagactgtta
ttggggaagagtgcttccattgacgcagaaaaatccatgatcacaaagctgaagaccgag
tgtggtagtcagttcacaaacaaacttgaaggaatgttcaaggacattgagttatcaaaa
gagataaatgaatcattcaagcaatcgtcacaagcgaggacaaaactaccatcaggaatt
gagatgagcgtccatgtgctgactacagggtactggcccacttatccaccaatggatgta
aggcttcctcatgaattgaatgtttatcaggacatatttaaggagttttaccttagcaag
tatagtgggagacgtctaatgtggcagagttcattaggtcactgtgtactgaaggcagat
tttccgaaagggaggaaagagctggctgtttccctatttcagacagttgtcttaatgcta
tttaacgatgctcagaagcttagttttcaagatataagagactctacaggcattgaggat
aaggaactgagaagaactctgcaatcccttgcctgtggaaaagtgagagtccttcagaag
gtgcccaagggcagggatgtggaggatgatgattctttcgagttcaatgaagcttttagt
gctcctctttatcgaataaaggttaatgctatccaaatgaaggaaacagtggaggagaac
acaagtaccacggaaagagtatttcaggaccgtcaatatcaggttgatgctgccattgtt
cggataatgaagacaaggaaagtgcttagccacacgcttttgataactgaactgtttcag
cagctcaaattccctatcaagccagctgatctgaagaaaaggatcgaaagcctgattgac
agggaatacctggagcgggacaagaacaatcctcaaatatacaattacttggcttag
DBGET
integrated database retrieval system
