Eucalyptus grandis (rose gum): 104444880
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Entry
104444880 CDS
T03547
Name
(RefSeq) ABC transporter A family member 1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104444880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
egr02000
]
104444880
Transporters [BR:
egr02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
104444880
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
ACT_13
R1_ABCA1
RsgA_GTPase
AAA_29
nSTAND3
Motif
Other DBs
NCBI-GeneID:
104444880
NCBI-ProteinID:
XP_010056970
UniProt:
A0ACC3M6W7
LinkDB
All DBs
Position
1:complement(44482855..44507532)
Genome browser
AA seq
1889 aa
AA seq
DB search
MGESWRQLKVMLRKNWLLKIRHPFATAAEILLPTIVILLLVAVRTRVDTQIHPAQAYIRN
DMLVEIGKGISPNFQEVLELLYSKREFLAFAPDTEETRMMINWMSIKFPLLKLVHKIYKD
EEELETYIRSDIFGTCSQIKNCSNPKIKGAVVFHGQGPQIYDYSIRLNHSWAFSGFPDTK
SIMDTNGPFANDLHLGVSIIPTMQYSFSGFYTLQQVLDSFIILSAQQTQSDMLNMTIEPL
SKSSERPSSLDLSWKQFIPSNIRIAPFPTREYTDDEFQSIIKSVMGVLYLLGFLYPISRL
ISYSVFEKEQKIKEGLYMMGLKDGIFHLSWFIAYSLQFAISSGIITVCTMDNLFKYSDKS
LVFVYFFSFGLSAIMLSFMICAFFTRAKTAVAVGTLCFLGAFFPYYTVNDEGVPMILKVI
ASLLSPTAFALGSINFADYERAHVGLRWSNVWLASSGANFLVCLVMMIFDSLVYCLIGFY
LNKVLTGQCGVLYPLDFILDKGFRQKKNSPKHQAVSVEVQDKNKHLKKGATFPEIDSEPA
IESISLEMKQQELDRRCIQIRNLHKVYATKKGKCCAVNSLQLTLYENQILALLGHNGAGK
STTISMLVGLLSPTSGDALVLGRNITTEMDEIRKCLGVCPQNDILFPELTVREHLEIYAV
LKGVKEDLVERVVTDMVDEVGLADKINTCTRALSGGMKRKLSLGIALIGNSKVIILDEPT
SGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEADELGDRIAIMANGSLKCCGSSLFLKH
QFGVGYTLTLVKSAPTASVAADIVYRHIPSAICISEVGTEISFKLPLASSPFFESMFREI
EGCMKRSMPSSGKSGVDENLGIESYGISVTTLEEVFLRVAGCDYDEAETATEENISVSAN
HSLSQGPRGSTIEMTYHNKVCGNYKKAVWILPALIGKACSLFVTAILSVLNFLSMQCCCC
SIISRSIFWQHCKALFIKRAIAARRDRKTIAFQLLIPAVFLFIGLLLLKLKPHPDQLSIT
FTTSHFNPLLSGGGGGGPIPFNLSWPIANEVAQHVEGGWIQRPKLSTYKFPDSQKAYADA
VEAAGPSLGPALLSMSEYLMSSFNESYQSRYGAIVMDDQNDDGSLGYTVLHNCSCQHAAP
TFINLMNSAILRLATQDKNMTIRTRNHPLPMTKSQRLQHHDLDAFSAAIIINIAFSFIPA
SFAVSIVKEREVKAKHQQLISGVSILSYWTSIYIWDFISFLFPSSFAIVLFYIFGLDQFI
GAGSFLPTFLMFLEYGLAIASSTYCLTFFFMDHTMAQNVVLLVHVFTGLILMIISFIMGL
LPTTRSANDFLKNFFRVSPGFCFADGLASLALLRQGMKDNSSNGAFDWNVTGASLFYLGV
ESIVYFSLTLGLELFPSHKLTVAAIKESLQKITGNLSNNSPSYSEPLLKSSSKSGSLDYD
EDIDVLMERKRVLSGSIDNAILYLRDLRKAYSGDKHQGIKVAVHSLTFSVQEGECFGFLG
TNGAGKTTTLSMLTGEEYPTGGTASVFGKDIRSNPKAARRHIGYCPQFDALLDYLTVQEH
LELYARIKRVPDQRINDVVMEKLVEFDLLKYAKRPSFTLSGGNKRKLSVAIAMIGDPPIV
ILDEPSTGMDPIAKRFMWDVISRLSTRRGKTAVILTTHSMNEAQALCTRIGIMVGGRLRC
IGSPQHLKTRFGNHLELEVKPTEVDHKDLDNLCLIIRGKLFDIPQTRSLLDDLEVCIGGM
DSITAENATVAEISLSKEMIMAVGHWLGNEERAMKLLMEAHISDGVVREQLSDQLFRDGS
IPLPIFCEWWLTKEKFSVIDSFVASSFPGAKFQNYNGLSVKYQLPYGEGFSLADVFGHLE
RNRSQLGISEYSISQSTLESIFNRFAANA
NT seq
5670 nt
NT seq
+upstream
nt +downstream
nt
atgggggaatcgtggaggcagctgaaggtcatgctccgcaagaactggctcctcaagata
cgtcaccccttcgccaccgccgccgagattttgcttcccacgatcgtcattttgttgctg
gtggcggtcaggacgcgggtggacacgcagattcatcctgcacaagcgtacatccggaac
gatatgttggtggaaattggcaaagggatatcccctaattttcaggaagttttggaatta
ctatactcgaagagggagtttttggcttttgcacccgacacagaagagaccaggatgatg
attaactggatgtccataaaatttcccttgctaaagctcgtacataaaatatataaggat
gaagaagagctggaaacctacattcggtcagacatctttggtacctgcagtcagattaag
aactgttcaaatcctaaaattaaaggagcagtcgtatttcatggtcaaggccctcaaata
tatgactacagtatacgcctcaaccattcatgggctttttcgggttttcctgacactaaa
tccattatggacaccaatggcccatttgccaacgacttgcatttgggtgtcagtatcata
ccaacgatgcagtatagcttcagtggattttatactcttcaacaggtcttagattcattt
atcattctgtctgcccagcaaacccagagtgacatgctgaatatgaccatcgaacctttg
tcaaaatcgtctgagagaccttcctcacttgatctatcttggaaacaattcattccctcc
aacataaggatagcgccatttccaactcgtgaatacactgatgatgaattccagtctatc
atcaagagtgttatgggagtattgtaccttttgggttttctctatccaatttctcgtcta
atcagctactctgtgtttgagaaggaacagaagataaaagaaggtctctacatgatgggt
ttgaaagatgggatatttcacctgtcttggtttattgcatattctttgcagtttgcaatt
tcctctggaattatcactgtttgtacaatggacaaccttttcaagtacagtgacaaatcc
ttggtttttgtgtacttcttctcctttggactgagtgcaatcatgctgtcatttatgata
tgtgcatttttcacacgagcgaaaacagctgttgcagttggtaccctttgtttccttggg
gccttctttccttattacacggtgaatgatgaaggtgttcctatgattctgaaagtcatt
gcttctctgctttcaccaacggcctttgctttggggtctattaactttgctgattatgaa
cgtgctcatgttgggcttcggtggagcaacgtttggctggcgtcatctggagcgaatttt
ctggtctgtctagtaatgatgatattcgactcacttgtgtactgtctcattggtttttac
ctgaataaggtccttacgggtcagtgtggagtgctttatcctttggattttatacttgac
aagggattcagacagaagaagaatagtccaaagcaccaggccgtcagtgtggaagtacag
gacaaaaataaacatttgaagaagggggccacttttcctgaaatagatagtgaacctgct
attgaatcaataagcttggaaatgaaacaacaggagcttgatcggcgatgcatacaaatt
aggaacttgcataaggtgtatgccacaaaaaaggggaaatgttgtgcagtgaactcactg
cagctaaccctatatgagaatcagatactagctcttctaggacataatggagccggtaag
agcacaacaatttcgatgcttgttggacttctttctcccacatcaggggatgctttggtg
cttggccggaatattacgacggaaatggatgagataaggaaatgtctgggagtttgccct
cagaatgatatcctttttcctgagctgactgttcgggagcacttggagatatatgcagta
ttgaagggtgtcaaggaagatctcgtggaacgtgttgtgactgatatggttgatgaagta
ggtctggctgataaaatcaacacctgcacaagggctctttccggtggaatgaagagaaaa
ttgtctcttgggattgctctgataggaaatagtaaggttatcattcttgatgaaccaact
agtggaatggatccatattcaatgcgattgacatggcagttaattaaaaaaataaaaaaa
ggaagaataattctattaaccactcattcaatggatgaagcggatgagctgggagaccgg
atagccataatggctaatggttccttaaaatgctgtggaagttcccttttcttgaagcat
caatttggggtgggctatacacttactttggtgaagtctgctccaactgcatctgttgct
gctgatattgtgtaccgtcatattccatcagcaatatgtataagcgaggttggaactgaa
atttccttcaagcttcctttggcgtcttctccttttttcgagagtatgtttagggaaatt
gaaggttgcatgaagagatcaatgccttcctcaggaaaatcaggtgtcgatgaaaatctt
ggcatagaaagctatggtatatctgtcacgacattggaggaagtattcctaagagtagcc
ggatgtgattatgatgaagctgaaactgctacagaggagaacatctctgtttcggctaat
cacagtctctctcaaggtcctcgtggcagtactattgaaatgacctaccacaataaagtt
tgtggaaattacaaaaaggccgtgtggattctgcctgccttaattgggaaagcgtgcagt
ctatttgttacagcaattttaagtgtgttgaatttcttaagtatgcagtgttgttgttgt
tccatcatttcaaggtctatattttggcaacattgtaaagctttgttcataaagagggcc
attgccgctcggagggaccgcaaaacaattgctttccagcttctgataccagcagttttt
ctatttattgggcttcttctgctgaagcttaagccacatcctgatcagctgtccatcact
ttcacaacttcccattttaatcctttactaagtggtggtggtggtggtggtccaattcct
tttaatctatcatggcctatagcaaatgaggtagcccaacatgttgaaggaggatggatt
cagagacccaaactgagtacatataaattccctgattcccaaaaggcatatgctgatgca
gttgaggctgctgggcctagtttaggaccagctttgctttccatgagtgaatatctcatg
tctagtttcaatgaatcctaccagtcaaggtatggggctattgtgatggatgatcaaaat
gatgatggaagtttaggttacactgtactgcacaattgttcttgtcaacatgctgctcca
actttcatcaatttaatgaattctgcaatacttaggctagctacacaagacaaaaacatg
actattcgaactcgcaatcaccctcttccaatgacaaagagccagcggttgcagcatcat
gatctggatgctttctctgctgcaattataattaatattgcgttctcatttattcctgct
tcatttgctgtttctattgtgaaggagcgggaagtgaaagctaaacaccagcaactaatt
agtggggtttccatactctcatattggacttctatctacatatgggacttcatcagcttc
ttattcccttcatcttttgcaattgttctcttctacatctttggtttggatcaatttatt
ggagctggtagctttcttcctacgttcctgatgtttttggagtatggcctggcaattgct
tcgtcaacatattgcctcacattcttctttatggaccataccatggcacagaatgtggtt
cttctggttcacgtcttcactggcctcattctcatgatcatctcattcatcatggggctc
ttgccgacaacaagaagtgcaaacgattttctcaagaacttctttagagtatcgccaggg
ttttgttttgctgatggacttgcttcactagctcttttacggcaagggatgaaggataac
tccagcaacggagcttttgattggaatgtgactggcgcctctcttttttaccttggtgta
gagagtattgtctacttctctttgactcttggccttgaactctttccttctcacaagctg
acagtggctgcaattaaagagtctttgcaaaaaattactgggaacctttctaataattcc
cctagttactcagagcctctcctaaaatcttcttccaaaagtggttctcttgattacgat
gaagatattgatgtcctaatggaacggaaaagggtactttcaggttccatcgataatgcc
atcctctatttgcgggaccttagaaaggcatactctggagataagcatcagggcataaag
gttgcagtacattctttgaccttttcagttcaagaaggagaatgctttggttttttgggg
acaaatggagcagggaagacaacaacactatcaatgctgactggggaggaatatccaact
ggtggaactgcttctgtatttggcaaagatatccgctcgaatcccaaagctgctcggcga
catattggttattgcccgcaatttgacgcactcttagattatcttactgtccaagagcat
cttgagctttatgcaaggatcaaaagagtcccagaccaaaggattaatgatgttgttatg
gagaagttagtggagtttgacttgcttaaatatgcaaaaagaccatcatttactcttagt
gggggaaataagcgcaaactatctgttgcaatcgcaatgattggagatcctcctatagtc
attctcgatgagccctctacaggtatggaccccattgccaaacggttcatgtgggacgtg
atatcccgtttatcaaccagacgaggaaagactgcagttattctaaccactcatagtatg
aatgaagctcaagctttatgtacgaggattggaataatggtcggaggccgattaagatgc
attgggagtccccagcatttgaaaactcgctttggcaatcatcttgagttagaggttaaa
cctactgaagttgaccacaaagacctggacaacctttgcctaattatccgaggaaaactt
tttgatattcctcaaaccagaagcttacttgatgaccttgaagtttgcattgggggcatg
gactccattactgcagaaaatgcaacagtggcagagattagcttatcaaaagaaatgata
atggcagttggacactggcttggcaatgaagaaagggccatgaaacttctaatggaggca
cacatttctgatggggttgttcgagaacagttgtcagaccagttgtttcgagatggtagt
ataccattgcctatattttgcgagtggtggttaaccaaagaaaagttttcagtcatcgac
tcatttgttgcatcatcctttcctggtgcaaaattccagaattacaatgggttgagtgtc
aaatatcagttgccatacggagaaggcttctcacttgccgatgtttttgggcatttggaa
agaaacaggagccagttgggaatatcagagtacagtattagtcagtctactttagaatcc
atattcaatcgttttgcagcaaatgcctga
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integrated database retrieval system
