Eucalyptus grandis (rose gum): 104444916
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Entry
104444916 CDS
T03547
Name
(RefSeq) LOW QUALITY PROTEIN: phenylalanine--tRNA ligase beta subunit, cytoplasmic
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
104444916
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
egr01007
]
104444916
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
egr03016
]
104444916
Enzymes [BR:
egr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
104444916
Amino acid related enzymes [BR:
egr01007
]
Aminoacyl-tRNA synthetase
Class II (U)
104444916
Transfer RNA biogenesis [BR:
egr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
104444916
Prokaryotic type
104444916
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
PhetRS_B1
B3_4
B5
DUF2740
Motif
Other DBs
NCBI-GeneID:
104444916
NCBI-ProteinID:
XP_039169515
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Position
5:29851324..29861324
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AA seq
334 aa
AA seq
DB search
MPILGNHSRPGTPDEKAWPARTTEKAIIRKEKHLEEETDEDEEVIYKIKVPANRYDLLCL
EGLAQALRVFNKQEETPQYSLRNISRGSMLKMHVKPETSQIHPYVVSAVLRGITFDEASY
NSFIDLQDKLHRNICRRRTLVAIGTHDLDTLEGPFSYEALPPSSISFVPLTQVKNFRGDE
LMEFYKVDLKLNKFLHIIENSXVFPVIYDSKRTVLSLPPIINGAHSAITLKTKNVLIECT
AMDLTKAKIVLNTMVTIFSAYCGKKYEVEPVEVIYSSGESFVYPDLSLYNMEVSLSYVND
SIGVALKAEEMTSLMTHSGATDYAAKDIKSFVEF
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgccaatcctaggtaaccattcccggccaggtacacctgatgaaaaggcctggccagcc
aggacgacggagaaggctatcatcagaaaggagaagcacctggaagaggagactgatgag
gacgaggaagtcatctataaaatcaaagttccggcgaacagatacgacttgctttgcctc
gaagggcttgctcaggccctacgtgtattcaataagcaggaggagacacctcaatacagt
cttcgtaacatcagcaggggatcaatgcttaagatgcatgtaaaaccagagacctcacaa
atccatccatacgttgtttctgctgtcttaagagggataacatttgatgaagccagttat
aacagcttcattgatcttcaagacaagctccatcgtaacatttgccggcgaagaacactg
gttgcaattgggactcatgacttggatacgctagaaggccccttcagctatgaggctttg
ccaccttccagtataagtttcgtccccttgacgcaggtgaagaacttcagaggtgatgaa
ctaatggaattttataaggtcgatttgaaattgaacaagttcttgcacataatagagaac
tcgnctgtgttccctgttatctatgattcaaagagaactgtcctgtctctgccgccaatt
atcaatggtgcacattcggcaataactttaaagacaaaaaatgttctcattgaatgtact
gcgatggacttaacaaaagctaagatagttctaaatacaatggtgacaatcttctcagca
tactgtgggaagaagtatgaagttgaaccagttgaagtgatatactctagtggggagtca
ttcgtttatcctgatttgtccctatacaatatggaagtgtccttatcttatgtcaacgat
tcaattggagtcgccttgaaagctgaagagatgacgtcattgatgacgcattcgggagcg
acagactatgcagcgaaggatataaaatccttcgtggaattttga
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