KEGG   Eucalyptus grandis (rose gum): 104445255
Entry
104445255         CDS       T03547                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a isoform X1
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    104445255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:egr04121]
    104445255
   03036 Chromosome and associated proteins [BR:egr03036]
    104445255
Enzymes [BR:egr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104445255
Ubiquitin system [BR:egr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    104445255
Chromosome and associated proteins [BR:egr03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     104445255
    Noncanonical PRC1 (PRC1.1)
     104445255
    Noncanonical PRC1 (PRC1.3/1.5)
     104445255
    Noncanonical PRC1 (PRC1.6)
     104445255
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-RING_5 zf-RING_6 TRAF3_RING zf-C3HC4_4 zf-Nse
Other DBs
NCBI-GeneID: 104445255
NCBI-ProteinID: XP_010057379
LinkDB
Position
5:complement(46188114..46191746)
AA seq 166 aa
MRARKHLRKASDDDVTRRNDTSNRGEPPQDDHEFQRSSSSRDLGKDGYVQVKLAEIREKV
QCPICLGIIRKTSAVMECLHRFCQECIAKHMLLRSNECPACHAHCGRNSLRADPRYDALI
EAFYPDVGKSKEENHSKKPGEIFSFMRMVRVEVEGKLVNDLDVDAT
NT seq 501 nt   +upstreamnt  +downstreamnt
atgcgagctcgaaaacacctccgcaaagcttcggacgacgacgtcacgcgccgcaacgac
acgagcaaccgcggggagccgcctcaagacgatcacgaatttcagcggagctcttcatcc
agggacttgggcaaggacggttatgttcaggtgaaattggctgaaataagggaaaaagtg
caatgcccaatctgtctaggaatcatacggaagacaagtgcagtgatggaatgcttgcac
cgtttctgccaagaatgcattgccaaacatatgctgctcaggagtaatgaatgccctgct
tgccatgcacattgtggccgtaattctctccgtgctgatccaagatatgatgctctgata
gaagcattttatcctgatgttggcaagtctaaggaagaaaatcactcaaaaaaaccaggt
gagattttttcatttatgcgcatggtgagggttgaagttgaggggaagcttgtgaatgac
ttggatgttgatgctacttaa

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