Eucalyptus grandis (rose gum): 104445305
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Entry
104445305 CDS
T03547
Name
(RefSeq) LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
egr01009
]
104445305
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egr03021
]
104445305
Enzymes [BR:
egr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
104445305
Protein phosphatases and associated proteins [BR:
egr01009
]
HAD phosphatases
Fcp/Scp phosphatases
104445305
Transcription machinery [BR:
egr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
104445305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
DSRM_2
Motif
Other DBs
NCBI-GeneID:
104445305
NCBI-ProteinID:
XP_039168202
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All DBs
Position
5:complement(48471168..48481381)
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AA seq
976 aa
AA seq
DB search
MYKSVVYHGEELAGEVEIYLQQPNRDGGGGEDEGCYQSRKEKARLVENVVKERVTVDHLS
PPSERCPPLAVLHTIAPSGICFKMEAKSSLSPDSPLSLLHSSCTRDSKTAVMLLGEDELH
LVAMYSRNGDRQHPCFWGFCVSSGLYSSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDR
IDALQRKINSESDPQRISGMHAEVKRYQDDKTILKQYVDNDQVVENGKVIKVQYENVPAF
SDNSQPLVRPLIRLPEKNIILTRINPLIRDTSVLVRLRPAWEELRSYLTARGRKRFEVYV
CTMAERDYALEMWRLLDPESNLIQSKEFPERIVCVKSGSRKSLFDVFQNGICHPKMALVI
DDRLKVWDEKDQPRVHVVPAFAPYYAPQAEANSAVPVLCVARNVACNVRGGFFKEFDEGL
LQRISEVAYEDDTRDIPCPPDVSNYLVSEDDTSASNGNKDPLSSDGMAGAEVERRLKDAI
PASIVSSAISNLDPRILASLQNALASSASTISLSTSQTTASTFPSAQFPEATGLVKKFGQ
VSPPEQSMQSSPAREEGEVPESELDPDTRRRLLILQHGQDTRDQAPGEPPFPVRPPIQVS
APRAQSHGTWFPVEEEMSPRRLTRSVPKEYPLDSEMHIDKHRPHHPSLFPNMESSIPPER
TVHESQRLQKRXRWKDDRLKLNHNFSTYHSISGEENSLSRASTTGRDFDSESGRPTPTRE
APAVVLQEIAMKCGAKVEFKPSLLLSMDLQFSIEAWFAGEKVGEGSGRTRREAQHQAAVA
SLRHLAGIYMNRAKSDPASRQGDGNRPSPASENGYFGSIYSFGNQPLPKGDPVPYATAAE
PSRFPDPRFEGPKTSMGSVSALKELCMMEGLGMVFQSPPQLTTNPTQNKEVHAQVEIDGQ
VLGRGIGLTWEEAKIQAAERALGSLRSMLGQVTPKRAGSPRTLQGIPSKRLKPEFPRAMQ
RMPSSARYPKNAPAVP
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaatcggtggtgtaccatggggaggagctggcgggggaggtggagatttatctg
caacagccgaacagggacggaggaggaggggaagacgagggttgttatcagagtaggaag
gagaaggcgagactggtggagaatgtggtgaaggagagggtcacggtcgatcacctgtcg
ccgcccagcgagaggtgccccccgctcgcggtgctccacaccattgctcctagtgggatt
tgcttcaaaatggaggccaagtcctccctgtcaccggactcgccgctctcccttttgcac
tcctcctgtaccagagacagcaagactgcagtgatgctactcggagaagatgaacttcac
ttggttgccatgtactcccgaaatggtgatagacaacatccatgcttttgggggttttgt
gtctcatcgggactttacagttcttgtcttgtcatgctgaacctaaggtgtcttgggatc
gtatttgatctcgatgaaacgctcattgtcgccaataccatgcgatcctttgaggatagg
attgatgctctccaacgcaaaataaattccgagtcagatccgcaacgcatttctggcatg
catgcagaggtgaagaggtatcaggatgataagacgattcttaagcagtatgtcgacaat
gatcaggttgttgagaatgggaaagtgatcaaagttcagtatgagaatgtccctgcgttt
tctgacaacagccaacctcttgttcgtccactcatacggttgccagagaaaaatattatt
ctgacccgcattaatccgctgattcgcgatacaagtgttctcgtgaggttgagacctgca
tgggaggaacttcgaagttacttaactgctagagggcgcaagcgctttgaggtttatgtt
tgcactatggctgaaagagattatgctttggaaatgtggaggcttcttgatccagagtca
aacttgatacagtcaaaagaatttccggagcgcattgtgtgtgttaagtctggttcaagg
aaatcactgtttgatgtctttcaaaatggaatatgccatcctaagatggcattggtgatt
gatgaccgtttaaaagtttgggatgagaaagaccaacctcgtgttcatgttgttcctgca
tttgccccatactatgctccccaagctgaggcaaacagtgctgttccagtattatgtgtt
gcaagaaatgttgcttgtaatgttagaggcggctttttcaaagaatttgatgagggtctt
ctacaaagaatttcagaagttgcatatgaagatgacacaagagatatcccttgtcctcct
gacgtgagcaactatttagtttcagaggatgacacttctgcctcaaatggaaacaaagat
ccactttcttcagatggaatggcaggtgctgaggtcgaaagaagattaaaggatgcaatt
ccagcttcaattgtctcttcagcaatttctaatttggatccaaggatacttgcatctctt
cagaatgcactggcatcttctgcaagcacaatttctttgtctacatctcagacaacagct
tctacctttcccagtgcacagtttcctgaagctactggtttagttaaaaaatttggccag
gttagtcctccagagcaaagcatgcagagttcacctgctagggaagagggtgaggtgcca
gaatcagaattagatcccgacaccaggaggcggctgctcatattgcaacacgggcaagat
actagggatcaagctcctggggaaccgccatttcctgtaagacctcctattcaagtatcc
gctccaagggcacagtcacatggaacctggtttccggtggaagaagagatgagtccaagg
cgactaaccagatcagttccgaaagaatatccattagattctgaaatgcatattgacaag
catcgacctcatcatccatccctttttcccaatatggagagttccattcctcctgaaaga
actgttcatgaaagtcaaagattgcaaaagaggtgaagatggaaagatgacaggctaaag
ctaaaccataacttttccacttatcattctatctctggtgaggaaaattctttgagtcgc
gcatcaacaactggtcgagattttgactctgaatcggggcgacctacaccaactagagaa
gctccagctgttgttttacaggaaattgcaatgaagtgtggagcaaaggtggagtttaaa
ccgtctttgcttctaagcatggatctgcagttttctattgaggcttggtttgcgggagag
aaggttggtgaagggagtggtagaacaagaagagaagctcaacaccaggctgctgtagct
tcgctaaggcatttggccggtatatacatgaaccgggcaaagtccgatcctgcttccaga
caaggagatggaaatcggccatccccagcaagcgagaatggatattttggtagtatttac
tcttttgggaatcaaccgttgcccaaaggggatcctgttccttatgctactgcagctgag
ccatcaagatttccagacccgagatttgaaggccctaagacttcaatgggctctgtttct
gcacttaaagaattatgcatgatggagggtcttggcatggtcttccaatccccaccacag
ctgacaacgaatcccacgcagaataaggaggttcacgcacaggttgaaatcgatgggcag
gttttggggaggggaattggcttgacatgggaagaagctaagatacaggctgctgagagg
gctctggggtcgttgaggtcaatgcttggtcaagttactccaaaacgtgcaggctccccc
agaacattgcaagggataccgagtaaacgactcaagccggagttcccgagagctatgcag
cggatgccctcttcagctagataccccaagaacgcccctgctgttccctaa
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