Eucalyptus grandis (rose gum): 104445308
Help
Entry
104445308 CDS
T03547
Name
(RefSeq) protein RTF1 homolog
KO
K15178
RNA polymerase-associated protein RTF1
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egr03021
]
104445308
Transcription machinery [BR:
egr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
104445308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
DUF2729
Herpes_UL35
Motif
Other DBs
NCBI-GeneID:
104445308
NCBI-ProteinID:
XP_010057458
UniProt:
A0A059C8D3
LinkDB
All DBs
Position
5:48511364..48514859
Genome browser
AA seq
653 aa
AA seq
DB search
MADLENLLLEAAGRTNGRGRNKQSLPPSRRRREGSYSDHGSDSRDDESDDNRGYSSRKPS
GSQVPLKKRYERDDDQGSLEEGDDDYGGSDRRGDSSDESDVGSDLYKNEDDRQRLAKLSE
LEREMILAERAEKMTDKSMAKNLRKDRKASQSRKETPPLASRGRSSSRSADRAAAKDEAL
NELRAKRLKQQDPEAHRKLRDGSRGGSANRDLSSAKRKAFPASSLSSSSRSESESRSDSD
DDASTGDGLVDSDDDRALLGSETLKFEDVKEITVRRSKLGKWLMEPFFEELIVGCFVRVG
IGMSKSRQPIYRLCIIRNVDASDPDRQYKLENKMTYKYLNVVWGNESSAARWQMAMVSDS
PPLEEEFNQWVREVERSGGRMPSKQDVLEKKEAIKKINTFVYSAATVKQMLQEKKSASSR
PMNIAAEKDRLRRELEIAQYKEDEAEVKRIKEKLQQLEATRQAQKTDAKAIKLAEMNRKN
RVENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVSKPNGGSEAGGANDNVNVAS
MVAESNGSVPVVSESGVVATVEALEAAADAGKLVDTNAPVDQGTESNLLHNFELPISLNV
LRKFGGAQGALTGFMARKQRIEATVGCRVPENDGRRHILTLTVSDYKRRRGLL
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcggacttggaaaatttgctgcttgaggccgctgggagaaccaatgggagaggaagg
aataagcagtcattaccgccatcaaggaggaggcgagagggctcgtactctgatcatggg
agcgactccagggacgatgagtctgatgataatcggggttattcaagcaggaagccatct
gggtctcaggttcctttgaagaaaagatatgaaagggatgatgatcaaggaagtttagaa
gaaggtgatgatgactatgggggctcggatcgcagaggtgacagtagcgatgaatctgat
gttggcagcgacttgtataagaatgaagatgatcgtcaaaggcttgcaaaattgtctgaa
cttgaaagagagatgattttggctgaacgggcagaaaagatgacggataaaagcatggcg
aaaaatttgaggaaggataggaaggcctctcagtcgcggaaggagacaccacctctcgcg
tcacgcggacgctcatcatctagatctgctgacagagctgctgccaaggacgaagcttta
aatgaactgagagcaaaaaggttaaagcagcaagacccggaggctcaccgtaaactgaga
gatggatctagaggaggttctgctaaccgagatttatcatcagccaagagaaaagctttt
cctgcttcaagtctgagtagttcgagccggagtgagagtgaaagtcggtctgacagtgat
gatgacgcatcaactggcgatggactggttgacagtgacgatgacagggcgctgctgggt
tcagagactctgaaatttgaggatgttaaagaaattacagttcggaggtcaaaactggga
aagtggttaatggagccctttttcgaggaattaattgttggttgctttgtaagggttgga
atcggaatgtcaaaaagcagacaaccaatctatcggctctgcattattcggaatgttgat
gcctcagatccagatcgacaatataagctagaaaacaagatgacgtacaagtacttaaat
gttgtgtgggggaatgaaagctccgcagctaggtggcagatggcgatggtttcagactcc
ccaccacttgaggaggaatttaatcagtgggttagagaggtggagcggagtggtggacgg
atgcctagcaaacaggatgtgttggagaagaaggaggccatcaagaaaattaacacattt
gtttactcagctgctacagtgaagcagatgttgcaggagaaaaaatcggcctcatcaagg
ccaatgaatatcgcagctgagaaggataggctgaggagagaattggaaatcgcacagtac
aaggaagatgaggcggaagtcaaacggatcaaagagaaacttcagcaattggaggccact
cgacaagctcagaagaccgatgcaaaggctattaagcttgctgagatgaacagaaagaac
agggttgagaatttcaagaatgcctcagaattgaagcccgtgaatacaggcctaaaagct
ggagaggctgggtatgatcccttttcaagaagatggaccaggtcaaggaattactacgtc
tctaagccgaatggaggaagtgaggctggaggtgccaatgacaatgttaatgttgcatcc
atggttgccgagagcaatggatcggtcccagttgtgtcagaatccggtgtggtagcaaca
gtcgaggcgcttgaagctgctgctgatgctgggaaactggttgatacgaacgcaccagtt
gatcagggcactgaatcaaatttgttgcacaatttcgaacttccaatctcattgaatgta
cttcggaagtttggtggggcccaaggagcattaaccggtttcatggctagaaaacagagg
attgaagcaacagttggatgccgtgtgccagagaatgatgggaggcggcatattttgacc
ctgacagttagcgattataagagacggagagggctcctctga
DBGET
integrated database retrieval system
