Eucalyptus grandis (rose gum): 104445649
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Entry
104445649 CDS
T03547
Name
(RefSeq) transcription initiation factor IIF subunit alpha isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104445649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egr03021
]
104445649
Transcription machinery [BR:
egr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
104445649
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
DZR
Motif
Other DBs
NCBI-GeneID:
104445649
NCBI-ProteinID:
XP_010057855
UniProt:
A0A059CB70
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Position
5:complement(59511608..59517638)
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AA seq
543 aa
AA seq
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MSFDLVLKPTCGGCGAAADLYGSNCKHMTLCSTCGKAMAESRAKCYECGATLTRLIREYN
VRAGPSSEKNYFIGRFVSGLPNFSKKKSAENRWSAQKEGLQGRQVTDTLREKYKNKPWLL
EDETGQSQYHGHLEGSQSATYYLLMLQGKEFAAIPAGSWYNFNKVAQYKQLTLEEAEEKM
KNRKKTADGYQRWMMKAANNGAAAFGEVEKSEDKDGSGGGSGGGGGGRGRKKTSGNDDEG
NASDKGEEDEEEEAARKSRLGLNKRAGDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTD
DDEAVGNDPHEREDLAPEAPPPPEIKDEEEEDEANEEEGGLSKSGKELKKLLGRASGVND
SDAEEDDDDEDMEDEVGFSPVLAPKQKEALKEEPAEESPSKPTPSASAKGTPPTSKSAKG
KRKLNGDDAKSSNGAPQKKVKTETEAKSSVKDESVPTSKSSVASKATQSDSKSASTPPTG
PVAEEEIRAFILQKAPVTTQDLVAKFKARLKSPEDKNAFADILRRISKIQKTNGSSYVVL
REK
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcgatctggtgttgaagccgacgtgcggcggctgcggcgcggcggcggatctc
tacggcagcaactgcaagcacatgacgctctgctccacctgcggcaaggcgatggcggag
tcccgggcgaagtgctacgagtgcggcgccacgctcactcgcttgattagggaatataat
gtcagggctggtcccagcagtgagaagaactacttcattggtagatttgtcagtggtttg
ccgaatttctcgaagaagaagagcgcggagaataggtggtctgcgcagaaggaagggctg
caggggcgtcaagttacggataccttgcgggagaaatataagaataaaccctggcttttg
gaggatgaaacgggacagtctcagtatcacggccatcttgaaggttcccaatcagctact
tactacctattaatgcttcaaggaaaggagtttgctgctatccctgctggttcttggtac
aactttaacaaagttgcgcagtacaagcaacttaccctggaggaagcagaagagaagatg
aagaacagaaagaaaactgctgatggttatcagaggtggatgatgaaagctgctaacaac
ggagctgctgcctttggtgaggttgagaaatccgaagacaaggatggtagtggaggaggc
agtggtggtggtggtggtgggaggggacgtaaaaagacaagtggtaacgatgatgaaggt
aatgcatcagacaagggagaggaagatgaagaagaagaggcagcaaggaagagtaggcta
ggactcaacaaaagggctggtgatgatgatgaagaaggtccaaggggaggtgatctagat
ttggatgatgatgacattgaaaagggtgatgactgggagcacgaagagatttttactgat
gatgacgaagctgttgggaatgacccacatgaacgagaagatttggcacctgaagctcct
cctcctccagaaatcaaagatgaggaggaggaggatgaagcaaatgaagaggaaggagga
ctgagtaaatctggaaaagaattgaagaagctgcttgggcgagctagtggggtcaatgat
tcagatgcagaggaagatgacgacgatgaggatatggaagatgaggtggggttttcacct
gtactggcccctaaacagaaggaagcccttaaagaggaacccgcagaagagagcccttca
aaacccactccttctgcatctgctaagggaactccacctacttccaaatctgccaaggga
aagaggaagttgaatggagatgatgctaaatcatcgaatggtgcaccccagaagaaggtg
aagacggaaactgaagcaaaatcttccgtaaaagatgaaagcgtgcctacttctaaaagc
agcgttgcctctaaagctacacagtcagattcgaagagtgcatctactccgcctactgga
ccggttgcagaagaagagataagagcattcattttgcagaaggcacctgttaccacacag
gatcttgtcgctaaattcaaagcaagactcaaaagccctgaggacaagaatgcctttgcc
gatatcttgaggagaatatccaagatacagaagaccaatggatctagctatgtggtgctg
cgagagaaatga
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