Eucalyptus grandis (rose gum): 104446060
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Entry
104446060 CDS
T03547
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104446060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
egr04121
]
104446060
Enzymes [BR:
egr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104446060
Ubiquitin system [BR:
egr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
104446060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-C3HC4_3
FAIM1
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
104446060
NCBI-ProteinID:
XP_010058271
UniProt:
A0A059DIV0
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Position
1:46088774..46092443
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AA seq
307 aa
AA seq
DB search
MAPAGGTCKEVHEPYPAAADYSVVISKQETTSTPAKSSIFSPGQRGICSSAGVDALLECP
VCTNFMYSPIYQCLNGHTLCSTCKIRVHNVCPICRSELGDIRCLALEKVAESLELPCRYK
NLGCREIFQYFSKPSHEQQCQFRPYNCPYAGSECSITGDIPMLVAHLREDHKVDMHNGCT
FNHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGEEYEARK
FSYSLEVGGNGRKLTWVGKPRSIRDGHRKVRDSQDGLIIQRSLALYFSGGDRQELKLRVA
GNIWKEE
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgctggaggcacttgcaaagaagttcatgaaccttaccctgccgccgctgat
tacagtgtagtaatcagcaaacaggagaccacttctacaccagcaaaatcttccattttc
tcacctggacaacgtggaatttgttcgagtgctggcgtagatgctctgctcgagtgccct
gtctgcacaaactttatgtattctccaatttaccagtgcctaaacggccacactttatgc
tcaacctgcaagattagagtccacaacgtttgcccgatttgtcggagtgaacttggagat
ataaggtgtctggcgttggagaaagtcgccgagtctctggaactcccttgcagatacaag
aatttaggttgtcgtgaaatcttccaatacttcagcaagcctagccacgagcagcagtgt
cagttccgtccatataattgcccttatgctggatctgagtgctccatcacgggcgacatt
ccaatgcttgttgctcatcttagagaagaccataaagtcgacatgcataatggctgcact
ttcaaccatcgatatgtcaagtccaacccacaggaagttgagaatgccacgtggatgtta
acagtgtttaattgttttgggaggcagttctgtttacactttgaggcattccaattaggc
atggctcctgtttacatggcctttctacgtttcatgggtgaagaatatgaggcgaggaaa
tttagctacagtttagaagtcggcgggaatggccgtaagctgacatgggtagggaaacca
agaagcatccgagatgggcaccggaaggttcgtgacagtcaggatggtctcatcattcaa
agaagtctggctctttatttctccggcggtgaccggcaagagctcaagttgagggtcgct
ggcaacatatggaaggaagaatga
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