Eucalyptus grandis (rose gum): 104447476
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Entry
104447476 CDS
T03547
Name
(RefSeq) WD repeat-containing protein LWD2
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
104447476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
egr04121
]
104447476
03036 Chromosome and associated proteins [BR:
egr03036
]
104447476
Ubiquitin system [BR:
egr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104447476
Chromosome and associated proteins [BR:
egr03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
104447476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_Gbeta
WDR55
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR41
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
MIOS_WD40
EIF3I
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
104447476
NCBI-ProteinID:
XP_039162423
LinkDB
All DBs
Position
1:47645023..47647594
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AA seq
344 aa
AA seq
DB search
MSSTELSMQSPIDTKRTGVSTFLAQWPVYSLGWSVRRDKGLRLAVGSFLEDHSNKVEFVQ
LDPDASNFASDPRLTFDHPYAPTNIMFFPSEDPSYPDLIATSGDYLRVWEISEDRTELKA
LLNGNKSSEFSSAITSFDWASFEARRIATCSNDTTCTIWDVEREVVDAQLVAHDKEVYDV
SWGGFNVFASVSGDGSVRVFDLRDKERSTIIYENPTPESPLLRLEWNKADPKSMATVGID
SNKVVLLDIRFPTTPLMELNRHKASVNAISWAPRIGRQLCSVGDDSRVLIWDVGTAGLRP
ENAGEVEPEMWFGSVAEINNVRWSPVELDWIAITFLNKLQLLRV
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcactgaactctccatgcaaagccctatcgacaccaaaagaacaggcgtttcc
actttcttagctcaatggccggtttactccttaggctggtccgttcgccgtgacaagggc
ttgcgccttgccgtcggaagcttcctcgaagaccatagcaacaaggtcgagtttgtccaa
ctcgaccccgacgcgtccaatttcgcttccgacccccgcctaaccttcgaccacccttat
gcgccgacaaacatcatgttcttcccctctgaggacccctcatacccggacctaatcgcc
acctccggagactacctgagggtgtgggagatcagtgaagaccggactgagctcaaagcc
ctcctgaacggcaacaagagcagcgagttcagctcggccatcacctcattcgattgggcc
agcttcgaagcccgccgcattgccacttgcagcaacgacaccacgtgcacgatctgggac
gtagagagggaggtggtcgacgcgcagctggttgctcacgacaaggaggtgtacgacgtc
tcatggggcgggttcaacgtcttcgcctcagtctccggggatggctctgtcagggttttc
gacttgagagataaggagcggtcgaccatcatatacgagaaccccaccccggagagcccg
ctgttgagactggagtggaacaaggctgacccgaagtcgatggccacggtcgggatcgat
agcaataaggtggtgctgttggacattaggtttccgaccacgcctctcatggagcttaat
aggcacaaggccagcgtgaatgcgatatcatgggcgccccgtatagggcggcagttgtgc
tccgtcggcgatgactcaagggtgttaatatgggatgttggcaccgccggattgcggcca
gaaaatgccggggaggtggagccggagatgtggttcgggtcagtggccgagatcaacaac
gtgcgctggtctccggttgagttggactggatcgccattactttcctgaataagctgcag
cttctcagagtttga
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integrated database retrieval system
