Eucalyptus grandis (rose gum): 104447950
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Entry
104447950 CDS
T03547
Name
(RefSeq) cryptochrome-1 isoform X1
KO
K12118
cryptochrome 1
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
104447950
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Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
Motif
Other DBs
NCBI-GeneID:
104447950
NCBI-ProteinID:
XP_010060002
UniProt:
A0A059BJY6
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Position
3:13372596..13377896
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AA seq
679 aa
AA seq
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MSGCSIVWFRRDLRVEDNPALAAGVRSGSVLAVFIWAPEEEGAYYPGRVSRWWLKHSLAH
LDSSLRSLGTCLITRRSTDSVSSLLELVKSTGATQLFFNHLYDPISLVRDHRAKEVLNAQ
GINVHSFNADLLYEPWEVNDDQGHPFTTFAGFWEKCLSMPYDPESPLLPPKRIISGDVSR
CPSEALVFEDESEKGSNALLARAWSPGWSNADKALTTFVNGPLLEYSKNRRKADSATTSF
LSPHLHFGEVSVRKVFHLVRIKQVLWANEGNKAGEESVNLFLKSIGLREYSRYMSFNHPY
SHERPLLGHLKYFPWVVDEGHFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFF
VKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGREFDRIDNPQFEGYKFDPN
GEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVSIDAAKVRLQDALS
IMWQHEATSRAAIENGTEEGLGDSSESAPIAFPQDIQMEENHETMRNNPPGPVHRYEDQM
VPSITSLVRADEEETSSGIQNSIGDTRAEVPANVNLNEEPRRDTLNEGVFQQLRPNNTQP
MYNFSPGLHNDAEDSTAESSSTGRRERDGGVVPVWSPSTSSYSDQIAGDENGIGNGSAFL
QRHPQSHQIINWRRLSQTG
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggtgtagcatagtgtggttcaggagagatctgagggttgaggacaaccctgca
ctagcggctggggtgaggtcaggttctgtgctggccgtgttcatctgggcacccgaggaa
gaaggcgcgtattaccctggtagggtttcgaggtggtggctgaagcacagcctggctcac
cttgactcgtccctcagaagccttggcacttgcctcatcaccaggagatccactgacagc
gtttcctccctcctggagcttgttaagtccactggagctactcagctcttctttaaccac
ttgtatgatcccatatcacttgtcagagatcacagagcaaaggaggttttgaacgcccag
gggataaatgtacactcattcaatgcagacttgctctatgaaccgtgggaagtaaatgat
gatcaaggccatccattcacaacctttgctggtttctgggagaaatgcctcagcatgcct
tatgatccagaatccccactgcttcctccaaagagaataatttcaggtgatgtatcaaga
tgtccttcagaagctttggtgtttgaagacgaatctgagaaaggaagcaatgcgcttctt
gctcgtgcttggtcccctgggtggagtaatgctgataaggctctgaccacatttgttaat
ggaccacttttagagtactctaaaaaccgcagaaaggctgacagtgctacaacctcattc
ctctctcctcacttgcacttcggagaagttagcgtgaggaaagtctttcacctggttcgc
atcaagcaggttttatgggcgaatgaggggaacaaggctggtgaagagagcgtgaacttg
ttccttaaatctattggtctacgagagtactcaaggtacatgagctttaaccatccttac
agccatgaaaggcctctccttggacacctcaagtacttcccatgggttgtggatgagggg
cattttaaggcatggagacaaggcagaactgggtatccactagttgatgccggcatgagg
gagttgtgggctacagggtggcttcatgatcgtattagagttgtggtttcaagcttcttt
gtgaaggttttgcaacttccatggagatgggggatgaaatacttctgggacaccctcttg
gatgcagatctagaaagtgatgcccttggatggcaatacatatccggtacaatccctgat
ggtcgtgagtttgaccgcattgataatccacagtttgaaggttacaagtttgatcctaat
ggagaatatgtacgacgatggcttcccgaactggccagactaccaacggaatggatacac
catccttggaatgcacctgaatcggttcttcaagctgctggaattgagcttggatcaaat
tatcctctccctattgtaagtatagatgcagccaaagtaaggctgcaagatgcactttcc
attatgtggcagcacgaagcaacatcaagagccgctatagaaaacggaactgaagaaggg
ctgggagactcatctgaatcagctccgatcgcttttcctcaagatattcaaatggaggaa
aatcacgaaactatgcggaataacccaccaggtccagttcaccgctatgaggatcagatg
gtaccaagcataacttctctggttagagcggatgaagaagagacttcttctggtattcaa
aactccataggtgatactagagcagaagtgcctgcaaatgtaaatttgaatgaagaacca
agaagagacacgttaaatgagggagttttccaacaacttcgaccaaacaacacccaacca
atgtataacttttcacctgggctacataatgatgctgaagattccactgcagagtcttcg
agcactggcaggagagagagggatggaggagtcgttccagtttggtcgccgtcaacttct
agttactctgaccaaattgcgggcgacgaaaatggaattggcaatggttcagcattttta
caaaggcatccacaatcccatcaaataattaattggaggcgattatctcaaactgggtga
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