Eucalyptus grandis (rose gum): 104448042
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Entry
104448042 CDS
T03547
Name
(RefSeq) rhamnogalacturonate lyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104448042
Enzymes [BR:
egr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104448042
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
DUF6575
Motif
Other DBs
NCBI-GeneID:
104448042
NCBI-ProteinID:
XP_010060116
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Position
6:4156232..4161602
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AA seq
655 aa
AA seq
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MCLEDEFKMTSSAVQLHIQDRHVVMDNGIVQVTLSKPEGIVTGIRYNGIDNLLEVLNDES
NRGYWDLVWNAPGSSTGIFDVIKGTSFSVVVQSDDQVELSFTRTYDPSLEGKLVPLNIDK
RFIMLRGSSGFYSYAIYEHLKDWPGFSLGETRIAFKLRKDKFHYMAMADNRQRNLPLPDD
RTPPRGQPLAYPEAVLLVDPIEPELKGEVDDKYQYSCDNKDSKVHGWICSDPPVGFWLIT
PSNEFRTGGPVKQNLTSHVGPTTLAVFLSAHYTGDDLVPKFQAGEEWKKVFGPVFLYFNS
VSDPVDPLFLWEGAKSQMMVEVESWPYSFLASEDFPPSDQRGNVRGRLLVSDRYVSDDYV
SANGAYVGLAPPGDVGSWQRECKLYQFWTTADEDGYFSINNARPGDYNLYAWVPRCIGDY
KYGVPISIMPGSNMDVGDLIYKPPRDGPTMWEIGIPDRSAAEFYVPDPNPNYINKLYVNH
PDRFRQYGLWERYAELYPDGDLVYTVGTSDYSKDWFFAQVTRKKDDKTYLGTTWQIKFAL
ANVDKNGVYKLRIALASATLSELQVRVNNPKSNPVFSTGLIGRDNSIARHGIHGLYWLYS
VDIKGTLLSEGDNIVFLTQPRSSSPFQGIMYDYIRLESPPSSPSTSAAAASSSGH
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttggaagacgaattcaagatgacatcctcggcagtgcaattgcatattcaagat
cgccatgtggtgatggacaatggcatcgtccaggtgactctgtcaaagcccgagggcatt
gtgactggcattcgatataatggcattgacaatctacttgaagttctcaacgatgagtcc
aacagaggatattgggatcttgtatggaatgcaccaggaagttccacagggatatttgac
gtgattaaaggaacaagttttagtgtggtagtacaaagtgacgaccaggtggagctctcg
ttcacaagaacttatgatccctcccttgaaggcaagctggttcccctcaacattgataaa
aggtttataatgctgcgtggtagctcgggcttctactcttacgccatctacgagcacttg
aaggactggccaggcttcagccttggcgaaacgaggatcgctttcaagcttaggaaagac
aagttccattacatggcaatggctgacaataggcaaaggaacctgccccttccggacgac
cgtacgccaccacgaggccaacctctcgcttaccctgaagccgtcttgctcgtcgatccg
atcgaacctgagctcaaaggggaggtggacgacaaataccaatattcatgcgacaacaaa
gacagcaaggtgcacggttggatctgcagcgatccgccggtgggattctggctaattact
cccagcaatgagttccgaaccggcgggcccgtcaagcagaacctcacctctcacgtcggc
cccaccaccctagcggtgtttctgagcgcccattacacgggagatgatctagtgccgaag
ttccaggctggagaggagtggaagaaagtgttcggccctgtgtttctctacttcaactct
gtctctgatcctgttgatcctctttttctctgggagggtgctaaatcacagatgatggtg
gaagtagagagttggccttacagttttttggcttcagaagattttcccccctcagaccaa
cgaggcaatgtccgtggcagattattagtctctgaccggtacgtcagtgacgactatgta
tccgcaaacggtgcctacgtcgggttagctccaccgggcgatgttgggtcgtggcaacgc
gaatgcaagctctaccaattctggactacagcggacgaggacgggtatttctccatcaac
aatgcacggcccggtgactacaatctctacgcatgggtccctcgatgcatcggcgattac
aagtatggcgttccaatctccataatgccaggcagcaacatggatgtgggcgatctcata
tacaagcccccaagagacgggccaacgatgtgggaaatcggcatccctgaccgctctgca
gcggaattctacgtgcctgatcccaaccccaactacatcaacaagctctatgtcaaccat
cctgacaggttcaggcaatatggactctgggaaagatatgccgagttgtatcccgacgga
gatttggtttacactgtcggcactagcgactactccaaggattggttctttgctcaggtt
actaggaagaaggatgataaaacctatctgggcaccacatggcagatcaagttcgccctt
gcgaacgtggacaaaaatggcgtttacaagctccggatagcgctcgcatctgccacactc
tccgagttacaggtccgggtaaataacccgaagtcgaacccggtgttctcgaccggattg
atcgggagggacaactcgatagcgaggcacgggatccacgggctctactggctgtacagt
gtggacatcaaggggactttgcttagcgaaggcgacaacatcgtcttcctcacgcaaccg
cggagcagcagcccgttccaggggatcatgtacgactacatccgtctcgaatctcctccg
tcgtcaccttcgacttcagcagcagcagcatcatcttcgggacattag
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