Eucalyptus grandis (rose gum): 104448335
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Entry
104448335 CDS
T03547
Name
(RefSeq) DNA polymerase I A, chloroplastic/mitochondrial
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03030
DNA replication
egr03410
Base excision repair
egr03420
Nucleotide excision repair
egr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104448335
03410 Base excision repair
104448335
03420 Nucleotide excision repair
104448335
03440 Homologous recombination
104448335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
egr03032
]
104448335
03400 DNA repair and recombination proteins [BR:
egr03400
]
104448335
Enzymes [BR:
egr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
104448335
DNA replication proteins [BR:
egr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
104448335
DNA repair and recombination proteins [BR:
egr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
104448335
NER (nucleotide excision repair)
GGR (global genome repair) factors
104448335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
DUF2458
Motif
Other DBs
NCBI-GeneID:
104448335
NCBI-ProteinID:
XP_010060415
LinkDB
All DBs
Position
6:10773601..10784518
Genome browser
AA seq
1088 aa
AA seq
DB search
MAMGFSTAQNAPLGPYCPSSLFLLRSRPRFFLRGSPAARSLCVRAETVPRGEFCQIQNAG
DTTSRSSLLDGSVTGESKRYKYNSSSSARMVTNPMSQSIDYKNASSLNSGWKVATESLRN
SKHGYGYKGHMCHDNSHGGPETIRMPLDGDGSNYNFLDCHCYEDSKSRATMNAHNILNAR
AATAVPFSEVITEGVDTHEEAQDLVLPESFSRDLQFDIPQTIPSGTLKTSHQFSPLPKLR
ENFGEKNLEVSEINGEKCLDAATVDATYSKIKEVKSVDTTDVNEERKVKLRSIYGKVLIV
NNKSIAKEVVRKLTNQYKHLVHACDTEVAEIDVKQATPVDHGEITCFSIYSGPQADFGNG
KSCIWVDVLDGGKELLLEFEAFFKDPDIKKVWHNYSFDSHIIENYGIKVSGFHADTMHMA
RLWNSSRRTEGGYSLEALTGDQRVISDAELGNEKDLIGKVSMKTIFGRNKVKKDGSEGKM
TTIPPVEELQREERELWICYSALDAMSTLRLFESLRRKLQRMSWRFDGKPCPQKSMLDFY
NEYWRPFGEILVKMEAEGMLVDRTYLAEIEKVAKSEQEVAADRFRRWASKYCEDAKYMNV
GSDAQLRQLLFGGTVNRKNPNQFLDVEKVFKVPNVDGFIEEGKKTPLKYRNITLHSIGVQ
LPAEIYTPSGWPSVSGVALKNLSGKVSADDDFTDDISNLESGDDVEDISESETSEAARVQ
VSTASRNIDTSAYGTAFSAFHNEDEGREACHAIAALCEMCSIDSLISNFILPLQGSNVSG
KDGRVHCSLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFVAKPGHSLIVADYGQLEL
RILAHLADCKSMLDAFRAGGDFHSRTALNMYQHIREAVEKKEVLLEWHPQPGEDKPPVPL
LKDAFGSERRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKETVDLWYKERREVLHWQEKR
KEEARKTGRVHTLLGRARQFPSLAHASRAHKNHVERAAINTPVQGSAADVAMCAMLRITN
NKQLEDLGWTLLLQVHDEVILEGPTESAEVAKAIVVECMSKPFFEGVNILKVDLAVDAKC
AKNWYAAK
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atggccatggggttctccaccgcgcagaacgctcccctggggccctactgcccctcctct
ctcttcctgctgcggtcccgcccccggttcttcctccgggggtcgcccgccgctcggtcg
ctctgcgtcagagccgagacggttccaaggggggagttttgccagatacaaaatgctgga
gacactacttctagaagcagcttacttgatggctctgtaactggtgaaagcaaacgctac
aaatataattctagttcttcagctaggatggtaactaatccaatgagtcaatctattgat
tataagaatgcaagttctttgaatagtgggtggaaggtagctactgaaagtctacgtaat
tcaaagcatggttatggatataagggacatatgtgtcatgacaactcacatggggggcca
gaaaccatacgaatgccacttgatggggatggtagcaactacaatttcctcgattgccat
tgctatgaagatagtaaaagtagggccacaatgaatgctcataacattcttaatgcacgt
gctgcaactgctgtcccattttctgaagttatcactgagggagtggatacccatgaggag
gcgcaggatctcgtgctgcctgagtcattcagtcgtgatctgcaattcgatatccctcaa
accattccttcaggaactttgaagacttcccatcaattttccccattacctaagttaagg
gaaaattttggcgagaagaatcttgaggtttctgaaataaatggagagaaatgcctcgat
gcagctacagtggatgcaacatattccaaaataaaggaagttaaatctgttgatacaact
gatgtgaatgaagagagaaaggtgaagctcagaagcatatatgggaaagttctgattgtt
aataacaagtctattgcgaaagaagttgtgcggaagctaacaaatcagtacaagcatcta
gtacatgcttgtgacacagaggtagctgagattgatgtcaagcaggcaacaccagttgat
catggagagataacatgcttcagtatatactctggacctcaggcagattttggcaatggc
aaatcctgtatctgggttgatgttcttgatggtgggaaggaacttttgcttgagtttgaa
gcgtttttcaaagacccagacattaaaaaggtatggcacaactacagctttgatagccat
attattgagaattatggaattaaggtttctggatttcatgctgatacaatgcatatggcg
cgcctttggaattcatcaaggaggacagagggtgggtattctcttgaagcactaacaggc
gaccaaagggtcatatctgatgcagagctgggtaatgagaaagacttaatcggcaaagta
tcaatgaaaaccatatttggcaggaacaaggtgaagaaagatggatctgaaggtaaaatg
accaccataccccctgtagaagaattacagagggaagagcgggaactgtggatatgctac
tctgcactggatgcaatgagtacgcttagactttttgagagcttaagaagaaaattacaa
agaatgtcatggagatttgatggtaaaccatgtcctcagaaatcaatgcttgacttctac
aatgaatattggcgaccatttggtgagattttggtcaaaatggaggctgagggaatgttg
gttgatcgaacatatctagctgagatagaaaaggtagccaaatcagagcaagaagttgct
gctgataggtttcgcagatgggcatccaagtattgtgaagacgccaagtatatgaatgta
ggaagtgatgctcaactgaggcaactactctttgggggaactgttaacaggaagaacccc
aaccagtttctagatgtggagaaagttttcaaagttccaaatgttgatggattcattgag
gaaggcaagaaaactcccttaaaatatcgaaatataactctgcacagcattggtgttcaa
ctgccagctgagatctacacaccgagcggttggccctcagtgagcggggttgctttaaag
aatttgtctgggaaagtttctgcagatgatgacttcacagatgacatttctaacctggag
tcgggggatgatgtggaagatatctctgaatcggaaactagtgaagctgctagagttcaa
gtatcaactgctagtaggaacatagatacttcagcttatggaacagcttttagcgccttt
cataatgaagatgaaggaagggaagcatgccatgccattgctgctctatgtgaaatgtgc
tctattgactctctcatatccaattttattctccccttgcagggaagtaatgtctcggga
aaggatggacgtgtacattgttcattgaatatcaatacagaaaccgggcgtttatcagct
aggaggcctaatttgcagaatcaaccggctttggagaaggataggtacaagatccgtcag
gctttcgttgctaaacctgggcactcacttattgttgctgactatggacagctggaactt
agaattcttgcacaccttgctgattgtaagagcatgttggatgcattcagagctggcggt
gatttccactcaagaactgcactgaatatgtaccaacatattcgtgaagcagttgaaaag
aaggaagtacttcttgagtggcatccccaacctggtgaagataaacccccagttccactc
ctaaaggatgcttttggttctgaaagaagaaaagctaaaatgctcaacttttccattgca
tatggaaaaactcctgtgggacttgcacgggattggaaggtctctgtagaggaagctaag
gaaacagttgatctctggtacaaggaaagaagggaggtgctccattggcaagaaaagcgt
aaagaagaagctagaaaaactggacgcgtacacactttgcttggtcgggcccgccagttc
ccatcacttgctcacgcctctcgtgctcataaaaaccacgttgaacgggctgcaatcaat
accccagtgcagggtagtgctgctgatgttgccatgtgcgccatgttacgaataacaaac
aataaacagttagaagatcttggatggacgctgcttttgcaggtccatgatgaggtgatt
cttgaaggaccaacagaatcagctgaggtcgcaaaggccatagttgtcgagtgcatgtcc
aaaccattctttgagggcgtgaatatccttaaggttgacttggctgttgatgccaaatgt
gcaaaaaattggtatgctgccaagtag
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