Eucalyptus grandis (rose gum): 104449127
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Entry
104449127 CDS
T03547
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr00040
Pentose and glucuronate interconversions
egr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104449127
Enzymes [BR:
egr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104449127
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
WSS_VP
Motif
Other DBs
NCBI-GeneID:
104449127
NCBI-ProteinID:
XP_010061459
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All DBs
Position
6:26810509..26812678
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AA seq
411 aa
AA seq
DB search
MHTKTTTKTQKHLKMSSLCIFALAMLHVVTHTSSARSMMRTPEMAEWNTTRRQLGTGSCR
TGNPTDDCWRCDPDWESNRKDLADCAIGFGRNAVGGRDGKIYVVTKSSDDPVNPPPGTLR
YGVIQDEPLWIIFDHDMVINLEQELVMNSYKTIDGRGQNIQISNGPCITIQNVSNIIIHN
IYIHDCLPAGNALVRNSPQLVGMRGKSDGDGISIYASHDIWIDHCTLASCSDGLIDAVIG
STAMTISNNYMLHHNEVMLMGHSDDYVDDKNMQVTIAFNFFGEGLVQRMPRCRHGYFHIV
NNVYAGWEMYAIGGSANPTINSQGNVFIASNSDRTKEVTKRENTAGNSEWKNWNWRSDRD
LMLNGAFFTPSGENSASSYLKASSMVARPASLLTTKDPSAGALNCQIGEQC
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcacacaaaaacaaccaccaaaacccagaaacatctgaaaatgtcatccctctgtatc
ttcgccttggcgatgctccatgttgtgactcacacatcctctgctcgttcaatgatgcga
acaccagaaatggccgagtggaatacaactcggaggcagctcgggacgggctcgtgccga
acagggaatcctactgacgattgttggaggtgcgaccccgactgggaatcaaaccgaaag
gacctggctgactgcgccatcgggttcggccgcaatgccgtgggcggacgagatgggaaa
atctacgttgtgaccaaatcctccgacgatccggtgaacccaccgccaggcaccctgagg
tacggcgtgattcaggatgagcccctgtggatcatcttcgatcacgatatggtcatcaat
ctcgagcaagagctcgtgatgaactcatacaagaccatagacggcaggggacaaaacatc
cagatatcgaacggcccgtgcataaccatccaaaatgtgagcaacattatcatacataac
atctacattcacgattgcctgcctgcggggaatgctctagtgaggaactccccgcagctc
gtcggaatgagaggcaaatcggacggcgacggcatatccatatacgcatcccatgacata
tggatcgaccattgtaccttggctagctgtagtgatgggctgatagatgcggtcatcggc
tcgacagcgatgaccatctcgaacaactacatgttgcatcacaacgaagtgatgctaatg
ggtcatagtgatgactatgttgatgacaaaaacatgcaagtcaccattgccttcaatttt
ttcggtgaaggcctggttcaaagaatgccaaggtgcaggcatggatactttcacattgtg
aacaatgtgtacgcaggttgggagatgtatgcaatcggaggaagtgctaatccgaccatc
aacagccaaggaaatgtcttcatcgcatcaaatagtgaccgcaccaaagaggtgaccaag
cgggaaaatacagctggaaattcagagtggaagaactggaattggagatcagacagagat
ctgatgttaaatggtgccttctttacaccttccggggaaaattccgcttcaagttacttg
aaggcatcgagcatggtggcgcgcccagcttcactgctgactactaaggatccaagtgcc
ggtgctctgaattgtcagattggtgagcaatgctga
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