KEGG   Eucalyptus grandis (rose gum): 104449318
Entry
104449318         CDS       T03547                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
egr  Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:egr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:egr03009]
    104449318
Ribosome biogenesis [BR:egr03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    104449318
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd EIF3I NBCH_WD40 WDR55 Beta-prop_TEP1_2nd Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_VPS8 Beta-prop_IP5PC_F Beta-prop_WDR41 WD40_Gbeta Beta-prop_Vps41 Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_DCAF12 Beta-prop_ACSF4 WDR54 Beta-prop_LRRK2 WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_NUP159_NUP214 Beta-prop_WDR75_2nd Beta-prop_IFT122_1st Beta-prop_BBS7 Beta-prop_SCAP VPS11_N
Other DBs
NCBI-GeneID: 104449318
NCBI-ProteinID: XP_010061738
UniProt: A0A059BRY9
LinkDB
Position
6:complement(32007401..32012320)
AA seq 451 aa
MEVVIASSSVADAGIGCWDLHTGAEQLRLKSCSSTARGLTSVGHRLVASSQLRDPSATSG
SVFYWSWDRPQVEVKSFPAEPILPLAANSEGTYIAGGGVSGEIYLWEVPTGKLLRKWHAH
YRAITCLVFSDDDSLVISGSEDGSVRVWSLFMIFDDMRRQEATHLYEHSFTGHALRITDV
VIGYGGSNAIIVSASEDRTCKVWSLSKGILLRNIVFPSMIYAIALDPGEHVFYAGSRDGK
IYVAALNAESSSNDAYGMYIIGSLADHSKVVTCLTYSNSLNLLVSGSEDGMVRVLDPKSG
NVVRMFRHSKGPINNVQIVRKQLGFNPRMVVNPQGSSRRHGSLLPPPLEKYTNSSDDDSD
FRTVVSLHGTSYEPLESPHISSNAMNQQIEELQRQSSSYATEMELERLKVDSKRSMQMVE
KWKQMYENLHQFCVDELLDIDQVQPTKAGFT
NT seq 1356 nt   +upstreamnt  +downstreamnt
atggaggtggtgatcgcctcctcctccgtcgccgacgccggcatcggctgctgggacctc
cacaccggcgccgagcagctccgcctcaagtcctgctcctccaccgcccgcggcctcacc
tccgtcggccaccgcctcgtcgcctcctcccagctccgcgacccctccgccacttccggc
tccgtcttctactggtcttgggataggccccaagtcgaagttaagagctttcccgccgag
ccgattttgccgctcgcggcgaacagcgagggcacgtacatcgctggcgggggtgtttcc
ggcgaaatttacctatgggaggttccaactggtaaactgcttagaaagtggcatgctcat
tatagggctattacttgcttggtattttcggacgatgattcgctcgtaatctccgggtca
gaggatggatccgtcagagtctggtcccttttcatgatatttgatgatatgaggaggcaa
gaagcaactcatctctatgagcatagttttactgggcatgcactgagaataactgatgtt
gtcattggttatggtggatcgaatgcaattatcgtttcagcatcagaggatcgaacatgc
aaggtctggagtttatctaaagggatattgttaagaaacattgtctttccatcaatgata
tatgcaattgctttggatcctggggaacatgtcttctatgctggcagcagggatgggaag
atatatgttgctgctctgaatgctgaaagtagctctaatgatgcttatggaatgtacata
atcggttcgttagctgatcacagcaaagttgtcacctgtctgacttacagtaacagctta
aacctactagttagtggctcagaggatggtatggttagagttttggaccctaaaagtgga
aacgtcgtgcggatgtttcgacattcaaaaggacctattaacaatgtccaaattgtgagg
aagcaactaggtttcaaccctcgaatggttgtaaatccacagggctcctcaagaaggcat
ggatccttgttacctccacctctagaaaaatacactaattcaagtgatgatgattcagac
ttcagaacagttgttagtctgcatggcactagctatgaacccctagagagtccacacatc
agttcaaatgcgatgaatcaacaaattgaagaactacagagacaatcttcttcctatgct
actgagatggagctagagaggctaaaggttgatagcaaaagatccatgcaaatggttgaa
aaatggaagcaaatgtatgaaaacttgcatcaattttgtgtagacgagcttttggacata
gatcaagttcagccaactaaagcaggttttacctga

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