Eucalyptus grandis (rose gum): 104449452
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Entry
104449452 CDS
T03547
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr00040
Pentose and glucuronate interconversions
egr01100
Metabolic pathways
Module
egr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104449452
Enzymes [BR:
egr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104449452
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
104449452
NCBI-ProteinID:
XP_010061913
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Position
6:36195926..36198456
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AA seq
389 aa
AA seq
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MVNCGASTASTSFDVLSYGAVGDGKTDDSPAFLEAWNAACISSSKLSILTVPAKKTFLLK
PVTFSGPCQPEYMYVLVSGNIAAPNSMTDYSGYQTNSWLAFSNVSGLMITGTGIIDGKGS
GWWSQPCIGNASNAATCTGPAALTFYRCTRLVLNGLRLVNSPRSHIALTSSQFVTISNIH
ISAPATSPNTDGIDISGSTHVYVRDSFIGTGDDCIAISAGSSHINVTRITCGPGHGISIG
SLGAHGENDTVENVTVQNCTLKGTMTGVRIKTWQGGSGYARKITFNKIRFIRVDNPIIID
QYYCPTQIGCKNETSGIRVSDISYSVIYGTSVTDKVINLSCDQNFGCSNIVLDHVYITST
VPNKKAYSYCFNAHGKYSHTRPAVTCLLK
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggtgaattgtggagcgagcacagcatcgacttctttcgatgtgttgagttatggagcg
gttggagacggaaagactgatgattcccccgctttcctggaggcatggaatgccgcctgc
atatcctcatcgaaactgtccattctcaccgtaccggcaaagaagactttcttgttgaag
ccagtgacgttcagcggcccatgccaacctgaatacatgtatgttctggtctctggcaac
attgctgcgcccaactcaatgacagattacagtggctaccaaaccaacagttggctcgcc
ttctctaatgttagtggtttgatgatcactggcactggaatcatcgacggaaagggttcg
ggctggtggtcacagccttgcattggaaatgcatctaatgctgcaacatgcacaggacca
gcagcattgactttttacagatgcacgagacttgtgctcaatggattgagacttgtgaac
agtccaaggtcacacatcgccctcaccagcagccagtttgtcaccatctccaacatccat
atctctgccccggcaacaagccctaacaccgatgggatcgatatctccggctcaacccat
gtatatgttcgcgattcattcatcggaactggtgatgattgcatcgctattagcgcaggc
tcgtcacacatcaatgtcactaggatcacatgtggacctggccatggtatcagcattgga
tctttgggggcacatggagagaatgacacagttgaaaatgtgaccgtgcaaaactgcaca
ttgaaaggtacgatgacaggagtgaggatcaagacatggcagggagggagtggatatgca
agaaaaataaccttcaataagatcagattcattcgggttgataatccgatcatcatcgac
cagtattactgccccacccaaatcggttgcaaaaacgagacatcgggaattagggtgagt
gacatctcgtattcggtgatatatgggacgtcggtcacggacaaggtcataaacctaagc
tgtgaccagaacttcggttgcagtaacatcgtcctggatcatgtatacataacatccact
gttccaaataagaaagcttattcctactgcttcaatgctcatggaaaatatagccacacc
agacctgcagtcacttgcttgctgaaataa
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