Eucalyptus grandis (rose gum): 104449585
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Entry
104449585 CDS
T03547
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3
KO
K14948
polypyrimidine tract-binding protein 2
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egr03041
]
104449585
Spliceosome [BR:
egr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104449585
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
RRM_ACIN1
RL
RRM_PARP14_3
DUF4523
P_C10
TGF_beta
Motif
Other DBs
NCBI-GeneID:
104449585
NCBI-ProteinID:
XP_010062098
UniProt:
A0A059BT87
A0ACC3KJ91
LinkDB
All DBs
Position
6:complement(37892839..37900281)
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AA seq
444 aa
AA seq
DB search
MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDIPSAINALQF
YANVQPSIRGRNVYVQFSSHQELTTVDQNAQARGDEPNRILLVTIHHMLYPITVEVLQQV
FSPYGFVEKIVTFQKSAGFQALIQYQSRQCAIAARTSLQGRNIYDGCCQLDIQFSNLDEL
QVNYNNERSRDFTNPNLPSEQKGRSSQPGYGDAGSIYALQAGGARAVPFPQMANAAAIAA
AFGGGLPPGISGTNDRCTVLVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLRNKPDHALVE
MGDGFQAELAVHFLKGAALFGKRLEVNFSKHPSITQGADTHDYMNSNLNRFNRNAAKNYR
YCCSPTKMIHLSSLPQEVTEEEIVKHLEEHGPIVNTKVFEMNGKKQALVLFENEEQATEA
LVCKHASSLAGSIIRISFSQLQEI
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgacagagccgtccaaagtgattcacgtccgcaacgtcgggcatgaaatttcagagaac
gatctgcttcaactatttcagccatttggagtcattacgaagcttgtaatgctccgtgca
aagaatcaggctcttctccaaatgcaggatataccgtctgcaattaatgccttgcagttc
tatgcaaatgttcagccaagtattaggggtaggaatgtatacgttcaattctcatcacat
caagagcttaccacagtggatcaaaatgctcaagcaagaggagatgagcccaatcggatt
ttactggtcaccattcaccacatgctgtatcctataaccgtagaggtgctgcaacaagtg
ttttctccttatggatttgtggagaagattgtgacatttcaaaaatcagccggttttcaa
gctcttattcaataccaatcacgccagtgtgcaattgcagcaagaacttctcttcaggga
cgtaatatctatgatggttgctgtcagctggacattcagttttcaaaccttgatgaacta
caagtgaactacaacaatgagagatcaagggattttacaaacccaaatttgccttctgaa
cagaaaggtagatcatcacagcctgggtatggggatgctggaagcatttatgcactccaa
gctggtggagcacgggcagttccatttcctcagatggctaatgctgctgcaatagcagct
gcctttggaggaggtttgccacctggaattagtggaactaatgacaggtgtaccgttctt
gtctctaatttaaatcctgataaaatagatgaggataagcttttcaacttattctctctt
tatggaaacattgtgaggatcaagcttctgcggaataaaccagatcatgcactggttgag
atgggtgatggatttcaggctgagttggctgtacactttttgaagggagctgcacttttt
gggaagcggctggaggtcaacttctccaagcatccaagcataactcaaggtgccgacaca
catgactacatgaactcaaatcttaaccgcttcaaccgtaatgctgcgaagaactaccgc
tactgttgctcaccaaccaagatgatacatctctccagtcttcctcaggaggtgacagag
gaggagatagtgaaacatctggaggaacatggccccattgtaaacacaaaggttttcgag
atgaatggcaaaaagcaggccctggttctctttgagaacgaggaacaggccaccgaagcc
ctagtgtgtaagcacgctagctctctggctgggtcgataatccggatttctttctcccag
ttgcaggagatttag
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integrated database retrieval system
