KEGG   Eucalyptus grandis (rose gum): 104449854
Entry
104449854         CDS       T03547                                 
Name
(RefSeq) DNA-repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    104449854
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:egr03400]
    104449854
DNA repair and recombination proteins [BR:egr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     104449854
SSDB
Motif
Pfam: BRCT PTCB-BRCT BRCT_2 RTT107_BRCT_5
Other DBs
NCBI-GeneID: 104449854
NCBI-ProteinID: XP_010062442
LinkDB
Position
6:complement(41723829..41728889)
AA seq 402 aa
MPNSKISPSDEGNKTAKRSLPSWMNSKHKGNSRNGKKAAGSGEDEDTGENERPEQSKGLD
GELVSSTLAKKSAGSGKPSSLSLDTLPFSKLLEGVVFVLSGFVNPERSTLRSQALEMGAE
YQPDWNSDCTLLICAFPNTPKFRQVEADNGTIVAKEWITECYTQRKLVDIESNLMHAGKP
WRRRSTSDKSGRDSENSPSRGYHKHVEKRSQSRQLTAASSKKANSNVTEDVLIPSKVKSW
AIIDLNRTTTWLESREEKPPADEIKKIAAEGIITCLQDAIDALEQNQDVRRISEQWNIVP
RVVEELIKLEGSGDTATSISNADLHRKAVDCKQIYEAEYSKLEYDASVKRKKPSTDDRKS
KGKKAAVSADAVAAYDSDETIEMTEEEIELAYNTVAAKVPEF
NT seq 1209 nt   +upstreamnt  +downstreamnt
atgcccaattcaaaaattagtccgagtgatgaggggaacaagactgcaaaacggagtctt
ccgtcctggatgaattccaaacacaaagggaattccaggaatggcaagaaagcagctggt
tctggtgaagatgaagacaccggggaaaacgagaggcctgaacaatccaaagggcttgat
ggagaactcgtgagcagcacactggccaagaaatctgcgggcagtgggaaaccttcttca
ttgagcttggataccttgccattttccaaacttctggagggcgtggtttttgtcttatcg
ggtttcgttaatccagagcgcagtaccttgcgatcccaggcccttgaaatgggagcagaa
tatcagcctgactggaactctgattgtacactactaatttgtgcttttccaaatactcca
aagtttcgacaagttgaggctgacaatggaacaattgttgcaaaggagtggataacggag
tgctacacccagaggaaactagttgacatcgaaagcaatctaatgcatgctggaaaacca
tggaggaggaggagtacttcagataaatcaggcagagattcagagaattcaccaagcaga
ggttatcataagcacgttgagaaaagatcacagtccagacagttgactgctgcatcctca
aagaaggcaaattctaatgttactgaggacgtactgattccttcgaaagtgaagagctgg
gctataattgatctgaacagaacgaccacatggctggaaagtcgagaagaaaagcctcca
gcagatgagataaagaaaatagcagctgaagggataataacttgcttacaagatgcaatt
gatgcccttgagcaaaatcaggatgtccgacgaattagtgaacagtggaacattgttcct
cgtgtggtggaggagctaattaagcttgaggggtctggagatactgctacttcgatctca
aatgcagacctgcacagaaaggccgtggattgtaagcagatttatgaagcagaatacagc
aaattggaatatgatgcttcagtgaagcgaaagaagcctagcactgatgatcggaaatcc
aaagggaaaaaggcagccgtctctgctgatgcagtggctgcatacgacagtgacgagacc
atcgaaatgaccgaagaggaaatagaactcgcatacaacaccgtggctgccaaagttcca
gagttttga

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