Eucalyptus grandis (rose gum): 104449859
Help
Entry
104449859 CDS
T03547
Name
(RefSeq) coatomer subunit beta'-2 isoform X1
KO
K17302
coatomer subunit beta'
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
egr04131
]
104449859
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
egr04147
]
104449859
Membrane trafficking [BR:
egr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
104449859
Exosome [BR:
egr04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
104449859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_IFT140_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
WD40_RFWD3
WD40_like
Beta-prop_WDR75_2nd
Beta-prop_Nup120_160
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
TPR_CcmH_CycH
WD_LRWD1
HEAT_GCN1
TPR_8
TPR_2
Beta-prop_DCAF12
TPR_12
Motif
Other DBs
NCBI-GeneID:
104449859
NCBI-ProteinID:
XP_010062449
UniProt:
A0A059BVC3
LinkDB
All DBs
Position
6:complement(41754174..41765146)
Genome browser
AA seq
917 aa
AA seq
DB search
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQSQTMVKSFEVTELPV
RSAKFIARKQWVVAGADDMFIRVYNYNTMDKAKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWVCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPD
LPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAIGYMKGSRRVVIGYDEGTIMVKLG
REVPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEITDGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFAWSSDGEYAVRESTSKIKIFSKNFQ
EKRSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAI
ASDTSFYILKYNRDVVSSFLDSGKVVDEQGVEDAFELLHETNERVRTGIWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVM
RGDLERANEILPSIPKEHHNSVARFLESRGMVEDALEVATDPDYRFELAIQLGRLGIAKE
IAAEVQSESKWKQLGELAMSTGKLDMAEECMNHAMDLSGLLLLYSSLGDAEGILRLASLA
KEQGKNNVAFLCLFMLGKLEDCLQLLIDSNRIPEAALMARSYLPSKVSDIVAIWRKDLNK
VNPKAAESLADPEEYPNMFDDWQVALSVESKVAETRGVHPPAEEYLNYSDRSHSTLVEAF
RNMQVDEENEPLENGDSNHEVTEVDGEEQNAEEHYAEEESQEEAVVVDADSNDGAVLVNG
NEAEEEWGTNNEGTPSA
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcagacttgaaatcaagaggaagctcgcgcaaagatcagagagggtaaagtct
gtcgatctgcatcctacggaaccatggatccttgcgagtttgtactcgggaactgtttgt
atctggaactaccagtcacagaccatggtgaaatctttcgaagtcaccgagcttccagtt
agatcagccaaatttattgcacggaagcagtgggttgttgctggagctgatgacatgttt
attcgtgtttacaattacaataccatggacaaggcaaaggtgtttgaggcacacacagat
tacattaggtgtgtggctgtccatcccactctcccatatgtgctctcgtcatctgatgac
atgctgatcaaactctgggactgggagaagggttgggtgtgtactcaaatatttgaagga
cattcccattatgtcatgcaagtgacatttaacccaaaagacaccaatacttttgctagt
gcatcacttgatcgtaccataaaaatctggaatcttggctcccctgacccaaactttact
ctagatgctcatcagaaaggagtcaattgtgtggattactttactggcggtgataaaccg
tatcttattactggttctgatgatcatactgcaaaggtctgggattatcagaccaaaagt
tgtgtccagacattggagggccatacacataatgtctcagctgtgtgttttcaccctgac
ctgcctataataattactggttctgaggatggtacagttcgcatatggcattcaactact
tataggcttgagaacacattgaattacgggctggaaagagtttgggctattgggtacatg
aaaggatcgcgccgggttgtgattggatatgacgaaggaaccatcatggttaaacttggt
cgggaggttcctgtagctagtatggacaatagtgggaagattatatgggcgaagcataat
gaaattcagacagtaaatattaagagcgtgggagcagattatgagattactgatggagag
agactgccattggctgttaaggagttggggacctgtgatctttatcctcaaagcttgaag
cacaaccccaacgggaggtttgttgttgtttgtggagatggtgaatacattatatacact
gcattggcatggagaaacaggtcctttggttctgcgttggagtttgcctggtcatctgat
ggagaatatgctgttagagaaagtacttcaaagatcaaaattttcagtaaaaatttccag
gaaaaaagaagtgtccggccaaccttttcggcggagcgtatttacggtggaacattgttg
gcaatgtgctccaatgacttcatctgtttctatgattgggctgaatgcaggttgatcaga
aggattgatgtcaacgtgaaaaacctctactgggctgacagtggcgatttggtggccatt
gccagtgatacatctttctatatcctgaagtacaatagggatgtagtttcttcttttctg
gacagtggaaaagtggtagatgaacaaggagttgaagatgcctttgagcttctgcacgag
accaatgaacgtgtcaggactggtatttgggttggtgattgtttcatctataataactct
tcctggaggcttaattactgtgttggtggtgaggtgacaacgatgtttcatctggacagg
cccatgtacttgctaggatatcttgcaagtcaaagccgggtgtatttaatagacaaagaa
tttaatgtcatgggatacactttacttctcagcttgatcgagtacaagactctagtgatg
cgtggggatcttgagagggcaaatgagattttaccttccattccgaaagagcaccataac
agtgtggcccgtttcttggaatcacgaggtatggtagaagatgctcttgaagtagccaca
gaccccgattatagatttgaactggccattcaacttggcagattggggattgcaaaggaa
attgctgcagaagtccagagcgagtcgaagtggaaacagttgggagaattagccatgtct
actggaaagttggatatggcagaagagtgtatgaatcacgcgatggatttgagtggttta
ctactgctttactcttccttgggtgatgcggaaggaattttaagacttgcatcccttgct
aaagagcaaggaaagaacaacgttgcatttttatgtctgtttatgttgggtaaattggaa
gactgcctccagctgttgatagatagcaatcggatacccgaggctgctctgatggcgcga
tcttatctgcctagcaaagtttcagacatagttgctatctggagaaaagacctcaataag
gttaatccaaaagctgctgaatctttggctgatccagaagagtatccaaacatgtttgat
gattggcaagtagcactttcggttgaatccaaagttgcagagaccaggggtgttcatcct
ccagcggaagaatatctcaattactctgatagatcacatagtactcttgtagaggctttc
agaaacatgcaagtggatgaggaaaatgaacctcttgaaaatggtgactcaaatcatgag
gtcactgaagtagatggagaggaacaaaatgctgaggaacattatgcagaagaagagagc
caagaggaggctgtcgtagtggatgccgattctaatgacggtgccgtactcgttaatggc
aacgaggctgaagaagagtggggtacgaataatgaaggaactccgtcggcctaa
DBGET
integrated database retrieval system
