Eucalyptus grandis (rose gum): 104449920
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Entry
104449920 CDS
T03547
Name
(RefSeq) protein PAF1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egr03021
]
104449920
Transcription machinery [BR:
egr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
104449920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Tudor_5
RXLR
Motif
Other DBs
NCBI-GeneID:
104449920
NCBI-ProteinID:
XP_010062533
UniProt:
A0A059BVK6
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Position
6:42251051..42257487
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AA seq
718 aa
AA seq
DB search
MASYRPFPPQSSFGPPPSQNPLPPPPPPPPISQPQAGTQYSQNWGYGGGGGGGDVPMPSA
ATAAFPQNYSQIHPNSNYPHQPYNPSRPQHPPPPHYAYQPPPPPPPPDSSYPPPPPPPPP
QNSASLQPPPQPQQPPMYYPSSSQYSQYNPTSMQSLQPPPPPPPPSSPPSSAIPPPPPSS
PPPPPPPQSKESVGSDRKSLERDKGASREREPGKYDRGFSVKPHKLPAPMVKKPNGNSGR
VETEEERRLRKKKEYEKQKQEEKHRHQMKESQNLISQKTHMMSSGKGHGSIVGSRMGDRK
ATPFLTGERTENRLKKPTTFLCKLKFRNELPDPSAQPKLMAFKKDKDRFAKYTITSLEKS
WKPELHVEPDLGIPLDLLDLNIYNPPSIRKPLDPEDEELLRDDDVVTPIKKDGIRRKERP
TDKGVSWLVKTQYISPLSLDSAKQSLTEKQAKELREMRGGRNILDNLNDRERRIKEIEAS
FEAAKSAPVHATNKNLYPVEVLPLLPDFDRYDDQFILASFDNDPTADSEVYSKLEQSARD
EYEAKAIMKSYEAIGSDPSKPEKFLAYMVPSADEISKDIYDVDEEIGYSWLREYHWDFVR
GGNDTEEPSTYLVSFDEGEARYVPLPRKLNLRKKRAEGRSSDEVEHFARPAGVTVRRRTI
PATIELKEPGVYSNSKRSASTSNLGALEDDEDDLGSPERVTQDEHMERSSGAEDDMSE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctataggccctttcccccacaatcctcatttggtccaccgccaagccaaaat
ccacttccgccgccgccgcctcctcctccaatttcccagccgcaggcaggtacgcagtat
tcacagaattggggttacggtggtggcggaggtggtggtgacgtgcctatgccatcagct
gctaccgctgcattccctcaaaactacagccaaattcacccaaattctaattatccccac
caaccttacaatccttcaagacctcaacatccccctcctccccattatgcataccagcca
cctccaccgcctccaccaccagattcttcatatcctccgcccccgccgccgccgcctcca
cagaattcagcaagcttacagcctcctccacaaccacaacagcctcctatgtattaccca
tcatcttcgcaatactctcagtacaatcccacatcaatgcagtcattgcagccaccgccg
cctccacctcccccgtcatctcctcctagttctgcaattccaccaccacccccaagttcg
cctcctcctcctcctcctcctcagagtaaagaaagtgtaggctctgataggaagtccctt
gagcgcgataaaggtgcttcaagagaacgtgaacctggtaaatatgatcgtggattttcc
gttaaaccacataaacttcctgccccaatggtaaaaaaaccgaatgggaattccgggagg
gtggagactgaagaagagaggaggttgagaaagaagaaagagtatgagaagcaaaaacag
gaggagaagcacaggcatcagatgaaggagtcacaaaatttgatatcacagaagacccat
atgatgtcttcagggaagggacatgggtcaattgtcggttctagaatgggggataggaaa
gcaacgcctttcttgacgggtgagaggactgagaataggttgaagaagccaaccactttt
ttgtgcaagttgaaatttcgaaatgagctgccagatccaagtgctcaaccaaaacttatg
gctttcaagaaagacaaggatcgctttgctaaatacactataacatctctggagaaaagt
tggaaacccgaacttcatgttgagcctgatcttggcatacctctcgacctgttggacctg
aatatatacaatcctccaagtattcgcaaaccccttgatccagaggatgaagaattactg
cgtgatgatgatgtggtgacaccaataaagaaggatgggataagaaggaaagaacgacct
accgataaaggtgtttcttggctagttaaaacacagtacatatctcctctcagtttggat
tcagcaaaacagtctttaactgagaaacaagcaaaagaattgcgtgaaatgaggggaggt
cgcaatattttggataatctcaatgacagggaaagacgaatcaaggaaattgaggcatcg
tttgaggcagccaagtcagcccctgttcatgcaaccaataagaacttatatccagttgaa
gttctgcctcttttacctgatttcgatcggtatgatgatcaatttattctcgcgtcattt
gataatgatcccacagctgattcagaagtctacagtaaattggaacaatcggcccgtgat
gagtatgaagcaaaggctattatgaaaagttatgaggccataggctctgatccatcaaaa
ccagagaaattcttagcctacatggtcccttctgcagatgagatatcgaaggatatttat
gatgtggatgaagaaattggctactcttggcttcgggaataccattgggattttgttcga
ggcggcaatgatacagaggagcccagcacatacctagtgtcatttgatgagggtgaagca
cgctatgtgcctcttcctagaaagctcaatttgaggaaaaagagagcagagggaagatcc
agtgatgaagtcgaacattttgcaagacctgctggtgttactgtgaggcgcagaacaata
ccagctactatcgagttgaaagaaccaggggtctactcaaattcaaagaggagtgcttct
acttctaacttaggggctttagaagacgatgaagatgatcttggatcacctgagagggtc
acacaggacgagcatatggaacgatctagtggagccgaagatgacatgtctgagtga
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