KEGG   Eucalyptus grandis (rose gum): 104449921
Entry
104449921         CDS       T03547                                 
Name
(RefSeq) LOW QUALITY PROTEIN: MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
egr  Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:egr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:egr03036]
    104449921
   03400 DNA repair and recombination proteins [BR:egr03400]
    104449921
Chromosome and associated proteins [BR:egr03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    104449921
DNA repair and recombination proteins [BR:egr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     104449921
SSDB
Motif
Pfam: MMS19_N MMS19_C DUF1751 UTP20_N
Other DBs
NCBI-GeneID: 104449921
NCBI-ProteinID: XP_010062535
LinkDB
Position
6:complement(42259404..42276697)
AA seq 1143 aa
MAELSELTRHIESYVDASRSPSEQVASLRAITSLLNKDLLSIEILVREMGLYLTNTDSVI
RCRGILLLAEVLDSLSSKPLETSTIHSLIIFFADRLADWKALRGALVGCLALIRRTDGVG
MVTISDAMAVMKSYVQNLHVQSLAQHDRKLCFELLECLLENYPDAFVSAGTEIFYAICEA
VDYEKDPQCLLVAFHIVELAMRQFPDLCGPSDGSVGEIFDILGRYFPIHFTHAKGQDVDV
TRDELSRALMFAFTSTPLFEPFAIPLLLEKLSSSLPLAKIDSLKCLSHCTLKYGTDRMEK
HAMAIWSSLRNIVFSSSQEPLLRFDSESVDGVGFSDDEIVKEALTVLEKLVMQSSVLFLN
LIVNDEDINLIFNNINSYKSFSNISLQSKQKIHGVGCILATAARSTISSCNRIFESFFPC
LINTLGLSTXNPSDNMSPSGKHAVSGTPNFGALYLSVILLEACRDLTVGSAQGASFPAHE
TFCCMLESFSASQARAFISNVGRGNETSIADVILGVKGLQILATFPGSFLSIPESLLEYI
LTALLSIITENFQSTLSWNLALKALVNIGSYIEKYHESKKEISYTVVVEKIGSLLTAAEC
VMPYSRKLEAISEVGMSGRNYMLKVVPRLEEAIFTNLSDLFENGDTGPVDNTVQLLECYT
NKVLPWINNSEGFDEVLHLFVINIWNQIECCKHFSIRMEEEDILEATIKTMKFVISNCSE
TSQNVIVQKAYAVVSSCHFFSWNESVVNPIEMRGLDISHELKLSIRDRLVLSLFSSVIMA
IHPQTHLPDVRATLWLFMEMLLKGHVPSTQALGSMVNKFGSKSNGQSTLNDCLLEEAMDI
IFNTSISHADSAFRISMGIEDKGTMTLKDLCLGASNNRQLQINAIVGLAWIGKGLLMRGH
EKIKDIVMILLECFSLKDGRHFRQDSGQENCEQDVSSSVMTYAADAFHIMMSDSEVCLSR
RYHANIRPLYKQRFFSTMMPILQALIIKSDSLFKRSILCRALAYIMSETPLVAVQGEAKK
LTPVLLDALLMFSKDNRDKDTMYSLLLLLSGILTDKSSQEDVIENAHIIINCLTRMVSYP
HMMLVRETALQCLVAMSMLPHSRIYPLRKQVLQAVSRALDDPKRSVRLQAVRCRQAWLSL
ATT
NT seq 3432 nt   +upstreamnt  +downstreamnt
atggcagaactcagtgagctgactcgtcacattgaatcatacgtggacgcttctcgttct
ccgagcgagcaggtggcaagtttacgggcaatcacttcccttttgaataaggatctccta
tctatagagatattggtcagagaaatgggcctgtatttgacaaatacagatagtgttatt
cgctgtagaggtatccttctcctagcagaagtgctggactctctttcatcgaagcctttg
gaaacatccactatccacagcttgataatattctttgcagatagactggcggattggaaa
gctttgcgaggtgcacttgttggttgcttggctttgatacggagaacagatggggtgggc
atggtgacaatttctgatgcaatggctgttatgaagtcatatgtgcagaatctacatgtc
cagtccttggctcagcatgatagaaagctttgctttgaacttctggagtgcctgctggaa
aattatcccgatgcatttgtttcagcgggcactgaaatcttttatgcaatatgtgaagct
gttgattatgaaaaggaccctcaatgcttactagtggcatttcatattgttgaactagcg
atgcgacaatttccagatttatgtggtccttccgatggctcagttggggagatatttgac
atattgggccgctactttccaatccatttcacacacgcaaaaggtcaggatgtagatgtc
acgagggatgagctctcccgggcattaatgtttgcattcacttctacgccactttttgag
ccatttgcaataccattgctgcttgaaaagctttcttcttctcttccactggcaaagatt
gattctttaaagtgtctcagccattgtacgttaaagtatggtacagacagaatggaaaaa
catgccatggcaatctggtcatcattgagaaacattgtcttttcttcatctcaagagcct
cttttacgctttgactctgaatctgttgatggcgttggattttcagatgatgaaattgta
aaagaggctttaacagttctggagaagcttgttatgcaaagcagtgttttattcttaaat
ttgattgttaatgatgaggatataaatctgatttttaacaacatcaatagctacaagagc
ttcagtaatatttccttgcaaagtaagcagaaaatacatggagttggttgcatcctggct
actgctgcaagaagtactatttcctcatgcaaccggatatttgaaagtttctttccctgt
ctgataaatactctggggctttcaaccntcaatccatctgataatatgtctcccagtggc
aagcatgcagtttccggaacacctaattttggagctctttacctcagtgtcatacttctt
gaggcttgcagagacttgactgtgggctctgctcaaggcgcatcttttccagcacatgaa
acattttgctgcatgcttgagagtttttcggcttcacaagctagagcttttatttctaac
gtggggaggggcaatgagacatccatagcagatgtcatccttggagttaaaggcttgcaa
attttggccacattccctggaagttttctatcaataccagagtccttattggagtacatt
ttgacagcactcctctcaattatcactgagaatttccagagcactctttcatggaacttg
gctttgaaggcacttgtcaatattggctcatacatagagaaataccatgagtccaagaaa
gaaatatcctatacggttgttgttgagaagattggttcattattgactgcagcagaatgt
gtgatgccttactctcgcaaactggaggccatttctgaggttggcatgagtggaagaaac
tatatgctaaaagttgttcccagactagaagaagccatattcactaatttatcagatctt
tttgaaaatggagacacagggccagttgacaacacagttcagcttttggaatgctacacc
aataaggtccttccatggataaacaactcagaaggttttgacgaagttcttcatctgttt
gtgatcaatatatggaaccaaatagaatgctgcaagcatttcagtataaggatggaagaa
gaggatattcttgaggcaacaataaaaactatgaagtttgtcatttcaaattgctcagag
acaagccagaatgtaattgtccagaaggcttatgcagttgtttcatcatgccatttcttt
tcatggaatgaatctgttgtcaatcccattgaaatgagagggttggatatttctcacgag
ctcaaactatctattagagacagattggttctctctctattttcatctgtaataatggca
atacatccccagactcaccttcctgatgtgagagctacactgtggttattcatggaaatg
ctcctcaaggggcatgttccatcaacacaggcactgggctctatggtgaacaaattcggt
tcaaaatccaatggccaaagtactttgaatgattgtcttttggaagaggcaatggatata
attttcaacacgagtattagccatgcagatagtgcttttagaatctctatgggcatagag
gataaaggcacaatgactttaaaggatttgtgtcttggtgcttcaaacaatagacagctt
caaatcaatgccattgttggattagcatggataggaaaaggtttgctgatgcgtggtcat
gaaaagattaaagatattgttatgatacttctagagtgtttttcattgaaagatgggagg
cactttagacaagattctggacaggaaaattgtgagcaggatgtatcttcttctgtcatg
acctatgcggcagatgcatttcatatcatgatgagtgattcagaagtttgtttaagtcga
agataccatgcaaatatacgacctctctacaagcaacggtttttctcgactatgatgccc
atacttcaagcattgatcattaaatctgattcattgttcaaaagatctatactttgtcgg
gctctggcatatataatgtctgaaactcccctggttgctgtccagggagaagcaaaaaag
ctcactccagttcttctagatgccttactgatgttcagcaaggataatcgggacaaggat
acgatgtacagtcttctgctgctcctgtctggaatattgacagacaaaagcagccaggag
gatgtaattgagaatgcacatatcattattaattgcctcaccaggatggtgagctatccc
catatgatgcttgttcgagagacggcacttcaatgtcttgttgccatgtcaatgctgcct
cattctaggatttaccccctgagaaaacaggtattgcaagctgtatcaagggcgcttgat
gatccaaagaggtctgtgcgactacaagctgtcagatgtcggcaagcatggttatcactt
gcaacaacttag

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