KEGG   Eucalyptus grandis (rose gum): 104450080
Entry
104450080         CDS       T03547                                 
Name
(RefSeq) LOW QUALITY PROTEIN: UBP1-associated protein 2C
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104450080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:egr03019]
    104450080
   03041 Spliceosome [BR:egr03041]
    104450080
Messenger RNA biogenesis [BR:egr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     104450080
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     104450080
Spliceosome [BR:egr03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    104450080
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8 PHM7_cyt
Other DBs
NCBI-GeneID: 104450080
NCBI-ProteinID: XP_039171632
LinkDB
Position
6:complement(43644687..43651291)
AA seq 429 aa
MDLAKKRKMDDNGVAPPDSSDPGAALTRDEGRRMLESFSKDQLLDLLQDALLRHPDLRAA
ARSVADADPTRRKLFIRGLGWDTTNDSLRXLFSTYGELEEAVVILDKATGKSKGYGFVTF
KHVDGALLALREPSKRIEGRVTVTQLAAAGNSGASTGNSADVSDRKIYVANVPIDMPADK
LLSHFLMYGEIEEGPLGFDKQTGKSRGFALFVYKTAEGAQAALAEPVKNIDGRPLNCKLA
IDGKRKPGPAGNVGPGNGHADAVGMSGPGSMPGSAPGQYGGPGGMGSYGGFQGPPGLAHL
SSSGPGMSAVGSQVPPNLGGAGGYGSGMVASYGGYGGPGATGYGGAGGALGAVGTGLGGA
GGGVGGTSSGLGTAGGSSLYRPSGGYPESGQYGLSSASAYPSQQHQPTGTSPAPRVPPGG
MYPNVPSYY
NT seq 1290 nt   +upstreamnt  +downstreamnt
atggatctcgcgaagaagcggaagatggacgacaacggcgtggcgccgccggactcctcc
gatcccggcgccgccctcacccgcgacgagggccgccggatgctcgagagcttctccaag
gaccagctcctcgacctcctccaggacgccctgctccgccaccccgacctccgcgccgcc
gcccgctccgtcgccgacgccgatcccacccgccgcaagctcttcatccgcggcctcggc
tgggacaccaccaacgacagcctccgcntcctcttctccacctacggcgagctcgaggag
gccgtcgtcatcctcgacaaggccacggggaagagcaagggctacggcttcgtcactttc
aagcacgtggacggcgctctgctcgccctgcgcgagcccagcaagaggatcgagggccgc
gtcacggtcacgcagctcgcggcggcgggtaattcgggcgccagcacgggcaactcggcc
gatgtctcggaccggaagatctacgtggcgaacgtgccgatcgacatgcctgcggataag
ctgttatctcacttcctgatgtacggcgaaatcgaggaagggccgctagggttcgataag
cagactgggaaatcgagagggtttgctctgtttgtttataagacggccgagggagctcag
gcggctctggccgagccagtgaagaacatagacggaaggccattaaattgcaagcttgca
attgatgggaagaggaagccgggtccagcgggtaatgttggacctggtaatggccacgct
gatgcagtggggatgagtggcccaggttcgatgccaggatcggctccggggcaatatggt
ggacctgggggaatggggtcctatggtgggttccagggtccgccgggattggctcatttg
agttccagcgggcctgggatgtcggccgtgggcagtcaggtgcctcccaatttaggtggt
gctggcggctacggcagtgggatggttgcttcatatggtggttatgggggaccaggagca
actggatatggcggtgcaggcggtgctttaggtgctgttgggactggtcttggtggtgca
ggtggtggtgttggtggcacaagcagtggattaggcaccgctggtggctcatctttgtac
aggccttccggagggtatccagaaagtggacaatatggcttatcgtctgcatcagcatac
ccgagccagcagcatcagccgacagggacttctccagcgccgagggttccaccaggagga
atgtatccaaacgtgccttcctattactga

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